Difference between revisions of "6.3.4.11-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE SQUALENE] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C * inchi key...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14386 RXN-14386] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE SQUALENE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C
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* inchi key:
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** InChIKey=YYGNTYWPHWGJRM-AAJYLUCBSA-N
 
* common name:
 
* common name:
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** cysteine_mitochondrial
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** squalene
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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* molecular weight:
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* ec number:
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** 410.725   
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[5.4.99.17-RXN]]
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** 1 [[S-CD-S-SP-Complex]][c] '''=>''' 1 [[CD-2S-SP-Complex]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 an S-sulfanyl-[cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-(S-sulfanyl)2-[disordered-form scaffold protein] complex[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14710]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4284]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11478]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 111-02-4
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{{#set: common name=cysteine_mitochondrial}}
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* LIPID_MAPS : LMPR0106010002
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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* PUBCHEM:
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{{#set: ec number=EC-2.8.1.7}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=638072 638072]
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{{#set: gene associated=Tiso_gene_14710|Tiso_gene_4284|Tiso_gene_11478}}
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* HMDB : HMDB00256
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{{#set: in pathway=PWY-7250}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00751 C00751]
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{{#set: reconstruction tool=pantograph}}
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* CHEBI:
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{{#set: reconstruction source=esiliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15440 15440]
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{{#set: reconstruction category=annotation}}
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* METABOLIGHTS : MTBLC15440
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: inchi key=InChIKey=YYGNTYWPHWGJRM-AAJYLUCBSA-N}}
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{{#set: common name=squalene}}
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{{#set: molecular weight=410.725    }}
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{{#set: consumed by=5.4.99.17-RXN}}

Revision as of 16:37, 10 January 2018

Metabolite SQUALENE

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC=C(C)CCC=C(C)CCC=C(C)C
  • inchi key:
    • InChIKey=YYGNTYWPHWGJRM-AAJYLUCBSA-N
  • common name:
    • squalene
  • molecular weight:
    • 410.725
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 111-02-4
  • LIPID_MAPS : LMPR0106010002
  • PUBCHEM:
  • HMDB : HMDB00256
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC15440



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