Difference between revisions of "Tiso gene 19952"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** chitobiosyldiphosph...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hexokinase * ec number:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.142-RXN 2.4.1.142-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNKIN-RXN MANNKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** chitobiosyldiphosphodolichol_beta-
+
** hexokinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.4.1.142 EC-2.4.1.142]
+
** [http://enzyme.expasy.org/EC/2.7.1.7 EC-2.7.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[NN-DIACETYLCHITOBIOSYLDIPHOSPHODOLICHO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''+''' 1 [[GDP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[D-mannopyranose]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15979]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 GDP-α-D-mannose[c] '''+''' 1 N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP[c]
+
** 1 ATP[c] '''+''' 1 D-mannopyranose[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 D-mannopyranose 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_8387]]
+
* [[Tiso_gene_3107]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[esiliculosus]]
+
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_1303]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[PWY-6140]], CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6140 PWY-6140]
−
** '''19''' reactions found over '''19''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6992]], 1,5-anhydrofructose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6992 PWY-6992]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-3861]], mannitol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3861 PWY-3861]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[esiliculosus]]
+
*** [[creinhardtii]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11028 11028]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04502 R04502]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01326 R01326]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=chitobiosyldiphosphodolichol_beta-}}
+
{{#set: common name=hexokinase}}
−
{{#set: ec number=EC-2.4.1.142}}
+
{{#set: ec number=EC-2.7.1.7}}
−
{{#set: gene associated=Tiso_gene_8387}}
+
{{#set: gene associated=Tiso_gene_3107|Tiso_gene_1303}}
−
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
+
{{#set: in pathway=PWY-6140|PWY-6992|PWY-3861}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:38, 10 January 2018

Reaction MANNKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • hexokinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-mannopyranose[c] => 1 ADP[c] + 1 H+[c] + 1 D-mannopyranose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6140, CMP-2-keto-3-deoxy-D-glycero-D-galacto-nononate biosynthesis: PWY-6140
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6992, 1,5-anhydrofructose degradation: PWY-6992
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-3861, mannitol degradation II: PWY-3861
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






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