Difference between revisions of "TransportSeed Light"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=13-BETA-GLUCAN-SYNTHASE-RXN 13-BETA-GLUCAN-SYNTHASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* common name:
 
* common name:
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** -beta-glucan_synthase_component_gls2
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** incomplete reductive TCA cycle
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** callose_synthase
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** callose
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** beta-glucan_synthesis-associated
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.34 EC-2.4.1.34]
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* Synonym(s):
 
* Synonym(s):
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** citric acid cycle variant
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** tricarboxylic acid cycle variant
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** TCA cycle variation I
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** incomplete reductive tricarboxylic acid cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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* '''4''' reaction(s) found
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** 1 [[CPD-12575]][c] '''+''' 1 [[1-3-beta-D-Glucans]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[1-3-beta-D-Glucans]][c]
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** [[SUCCCOASYN-RXN]]
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* With common name(s):
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** [[MALATE-DEH-RXN]]
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** 1 UDP-α-D-glucose[c] '''+''' 1 a 1,3-β-D-glucan[c] '''=>''' 1 UDP[c] '''+''' 1 a 1,3-β-D-glucan[c]
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** [[PYRUVATE-CARBOXYLASE-RXN]]
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** [[FUMHYDR-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* '''3''' reaction(s) not found
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* [[Tiso_gene_7603]]
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** [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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** IN-SILICO_ANNOTATION
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** [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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***EC-NUMBER
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** [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
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* [[Tiso_gene_5462]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7967]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_7966]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3322]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5460]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6773]], 1,3-β-D-glucan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6773 PWY-6773]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-224756}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03118 R03118]
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{{#set: taxonomic range=TAX-183939}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-183925}}
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** [http://www.uniprot.org/uniprot/P38631 P38631]
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{{#set: common name=incomplete reductive TCA cycle}}
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** [http://www.uniprot.org/uniprot/P40989 P40989]
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{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
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** [http://www.uniprot.org/uniprot/Q10287 Q10287]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P38678 P38678]
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{{#set: reaction not found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=-beta-glucan_synthase_component_gls2}}
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{{#set: common name=callose_synthase}}
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−
{{#set: common name=callose}}
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−
{{#set: common name=beta-glucan_synthesis-associated}}
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{{#set: ec number=EC-2.4.1.34}}
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{{#set: gene associated=Tiso_gene_7603|Tiso_gene_5462|Tiso_gene_7967|Tiso_gene_7966|Tiso_gene_3322|Tiso_gene_5460}}
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{{#set: in pathway=PWY-6773}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:39, 10 January 2018

Pathway P42-PWY

  • taxonomic range:
  • common name:
    • incomplete reductive TCA cycle
  • Synonym(s):
    • citric acid cycle variant
    • tricarboxylic acid cycle variant
    • TCA cycle variation I
    • incomplete reductive tricarboxylic acid cycle

Reaction(s) found

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TransportSeed_Light&oldid=13993"