Difference between revisions of "Tiso gene 8723"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16529 == * left end position: ** 586 * transcription direction: ** POSITIVE * right end position: ** 1809 * centisome position: ** 13.63107...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13298 RXN-13298] ==
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== Gene Tiso_gene_16529 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 586
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* common name:
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* transcription direction:
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** chloroplast_beta-keto_acyl_reductase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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** 1809
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* centisome position:
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** 13.631077   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATCD]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-14271]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-14275]][c]
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** [[pantograph]]-[[creinhardtii]]
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* With common name(s):
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* [[ATCDm]]
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** 1 H+[c] '''+''' 1 3-oxoicosanoyl-CoA[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 (3R)-3-hydroxy-arachidoyl-CoA[c]
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** [[pantograph]]-[[creinhardtii]]
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* [[ATDCD]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ATDCDm]]
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* [[Tiso_gene_9871]]
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** [[pantograph]]-[[creinhardtii]]
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** IN-SILICO_ANNOTATION
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* [[ATDGD]]
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* [[ATDTD]]
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[ATDTDm]]
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* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
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** [[pantograph]]-[[creinhardtii]]
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** '''16''' reactions found over '''16''' reactions in the full pathway
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* [[ATDUD]]
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== Reconstruction information  ==
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** [[pantograph]]-[[creinhardtii]]
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* [[annotation]]:
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* [[ATDUDm]]
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** [[pathwaytools]]:
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** [[pantograph]]-[[creinhardtii]]
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*** [[experimental_annotation]]
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* [[ATGD]]
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*** [[in-silico_annotation]]
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** [[pantograph]]-[[creinhardtii]]
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* [[ATID]]
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** [[pantograph]]-[[creinhardtii]]
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* [[ATIDm]]
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** [[pantograph]]-[[creinhardtii]]
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* [[ATUD]]
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** [[pantograph]]-[[creinhardtii]]
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* [[ATUDm]]
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** [[pantograph]]-[[creinhardtii]]
 +
* [[CDPKIN-RXN]]
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** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[DADPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[DCDPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[DGDPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[DTDPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[DUDPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[GDPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[NDPK]]
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** [[pantograph]]-[[creinhardtii]]
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* [[NDPKm]]
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** [[pantograph]]-[[creinhardtii]]
 +
* [[NUCLEOSIDE-DIP-KIN-RXN]]
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** in-silico_annotation
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***ec-number
 +
** experimental_annotation
 +
***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14120]]
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** in-silico_annotation
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***ec-number
 +
** experimental_annotation
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***ec-number
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14228]]
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** in-silico_annotation
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***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[UDPKIN-RXN]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=586}}
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.1.1.330}}
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{{#set: right end position=1809}}
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{{#set: gene associated=Tiso_gene_9871}}
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{{#set: centisome position=13.631077    }}
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{{#set: in pathway=PWY-7036}}
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{{#set: reaction associated=ATCD|ATCDm|ATDCD|ATDCDm|ATDGD|ATDTD|ATDTDm|ATDUD|ATDUDm|ATGD|ATID|ATIDm|ATUD|ATUDm|CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NDPK|NDPKm|NUCLEOSIDE-DIP-KIN-RXN|RXN-14120|RXN-14228|UDPKIN-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:40, 10 January 2018

Gene Tiso_gene_16529

  • left end position:
    • 586
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1809
  • centisome position:
    • 13.631077
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8723&oldid=14051"