Difference between revisions of "PWY-6118"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glucose-6-p...")
 
(Created page with "Category:Gene == Gene Tiso_gene_17310 == * left end position: ** 1715 * transcription direction: ** POSITIVE * right end position: ** 3727 * centisome position: ** 45.2029...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLU6PDEHYDROG-RXN GLU6PDEHYDROG-RXN] ==
+
== Gene Tiso_gene_17310 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 1715
−
* common name:
+
* transcription direction:
−
** glucose-6-phosphate_1-dehydrogenase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/1.1.1.49 EC-1.1.1.49]
+
** 3727
 +
* centisome position:
 +
** 45.202953   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ACID-PHOSPHATASE-RXN]]
−
** 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 D-glucopyranose 6-phosphate[c] '''+''' 1 NADP+[c] '''=>''' 1 6-phospho D-glucono-1,5-lactone[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c]
+
* [[RXN-5822]]
−
 
+
** in-silico_annotation
−
== Genes associated with this reaction  ==
+
***ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_16918]]
+
* [[PWY-6348]]
−
** IN-SILICO_ANNOTATION
+
* [[PWY-5083]]
−
***EC-NUMBER
+
* [[NADPHOS-DEPHOS-PWY]]
−
* [[Tiso_gene_14877]]
+
* [[NAD-BIOSYNTHESIS-II]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
+
−
** '''14''' reactions found over '''18''' reactions in the full pathway
+
−
* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[synechocystis]]
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=1715}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15841 15841]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=3727}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02736 R02736]
+
{{#set: centisome position=45.202953    }}
−
* UNIPROT:
+
{{#set: reaction associated=ACID-PHOSPHATASE-RXN|RXN-5822}}
−
** [http://www.uniprot.org/uniprot/P11411 P11411]
+
{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
−
** [http://www.uniprot.org/uniprot/P12646 P12646]
+
−
** [http://www.uniprot.org/uniprot/Q00612 Q00612]
+
−
** [http://www.uniprot.org/uniprot/P54996 P54996]
+
−
** [http://www.uniprot.org/uniprot/P21907 P21907]
+
−
** [http://www.uniprot.org/uniprot/P54547 P54547]
+
−
** [http://www.uniprot.org/uniprot/O51581 O51581]
+
−
** [http://www.uniprot.org/uniprot/P0AC53 P0AC53]
+
−
** [http://www.uniprot.org/uniprot/P11413 P11413]
+
−
** [http://www.uniprot.org/uniprot/P29686 P29686]
+
−
** [http://www.uniprot.org/uniprot/P44311 P44311]
+
−
** [http://www.uniprot.org/uniprot/P56110 P56110]
+
−
** [http://www.uniprot.org/uniprot/Q9JTW0 Q9JTW0]
+
−
** [http://www.uniprot.org/uniprot/O25730 O25730]
+
−
** [http://www.uniprot.org/uniprot/O51240 O51240]
+
−
** [http://www.uniprot.org/uniprot/O66787 O66787]
+
−
** [http://www.uniprot.org/uniprot/P05370 P05370]
+
−
** [http://www.uniprot.org/uniprot/P11410 P11410]
+
−
** [http://www.uniprot.org/uniprot/P11412 P11412]
+
−
** [http://www.uniprot.org/uniprot/Q9R5T2 Q9R5T2]
+
−
** [http://www.uniprot.org/uniprot/P48828 P48828]
+
−
** [http://www.uniprot.org/uniprot/P37986 P37986]
+
−
** [http://www.uniprot.org/uniprot/Q8IKU0 Q8IKU0]
+
−
** [http://www.uniprot.org/uniprot/Q27741 Q27741]
+
−
** [http://www.uniprot.org/uniprot/P48826 P48826]
+
−
** [http://www.uniprot.org/uniprot/Q42919 Q42919]
+
−
** [http://www.uniprot.org/uniprot/P37830 P37830]
+
−
** [http://www.uniprot.org/uniprot/Q9FY99 Q9FY99]
+
−
** [http://www.uniprot.org/uniprot/Q49700 Q49700]
+
−
** [http://www.uniprot.org/uniprot/P73411 P73411]
+
−
** [http://www.uniprot.org/uniprot/Q8L743 Q8L743]
+
−
** [http://www.uniprot.org/uniprot/Q43793 Q43793]
+
−
** [http://www.uniprot.org/uniprot/O65856 O65856]
+
−
** [http://www.uniprot.org/uniprot/Q43839 Q43839]
+
−
** [http://www.uniprot.org/uniprot/O81978 O81978]
+
−
** [http://www.uniprot.org/uniprot/O24357 O24357]
+
−
** [http://www.uniprot.org/uniprot/O24358 O24358]
+
−
** [http://www.uniprot.org/uniprot/O24359 O24359]
+
−
** [http://www.uniprot.org/uniprot/O22404 O22404]
+
−
** [http://www.uniprot.org/uniprot/O22405 O22405]
+
−
** [http://www.uniprot.org/uniprot/O22406 O22406]
+
−
** [http://www.uniprot.org/uniprot/Q9FJI5 Q9FJI5]
+
−
** [http://www.uniprot.org/uniprot/Q9LK23 Q9LK23]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=glucose-6-phosphate_1-dehydrogenase}}
+
−
{{#set: ec number=EC-1.1.1.49}}
+
−
{{#set: gene associated=Tiso_gene_16918|Tiso_gene_14877}}
+
−
{{#set: in pathway=PWY-7268|P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 16:40, 10 January 2018

Gene Tiso_gene_17310

  • left end position:
    • 1715
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3727
  • centisome position:
    • 45.202953
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6118&oldid=14058"