Difference between revisions of "GLNSYN-PWY"

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(Created page with "Category:Gene == Gene Tiso_gene_20000 == * left end position: ** 60 * transcription direction: ** POSITIVE * right end position: ** 1742 * centisome position: ** 3.2258062...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase * e...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_20000 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16134 RXN-16134] ==
* left end position:
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* direction:
** 60
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** LEFT-TO-RIGHT
* transcription direction:
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* common name:
** POSITIVE
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** acyl-coenzyme_a_oxidase
* right end position:
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* ec number:
** 1742
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
* centisome position:
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** 3.2258062   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[1.2.1.13-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-17385]][c] '''=>''' 1 [[CPD-17386]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 oxygen[c] '''+''' 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''=>''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
***ec-number
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* [[GAPDHSYNEC-RXN]]
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== Genes associated with this reaction  ==
** experimental_annotation
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Genes have been associated with this reaction based on different elements listed below.
***automated-name-match
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* [[Tiso_gene_18566]]
* [[GAPOXNPHOSPHN-RXN]]
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** IN-SILICO_ANNOTATION
** [[pantograph]]-[[athaliana]]
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***EC-NUMBER
** [[pantograph]]-[[athaliana]]
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== Pathways  ==
** [[pantograph]]-[[synechocystis]]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
** [[pantograph]]-[[esiliculosus]]
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** '''14''' reactions found over '''14''' reactions in the full pathway
** [[pantograph]]-[[creinhardtii]]
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== Reconstruction information  ==
** [[pantograph]]-[[creinhardtii]]
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* [[annotation]]:
* [[TRIOSEPISOMERIZATION-RXN]]
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** [[pathwaytools]]:
** [[pantograph]]-[[esiliculosus]]
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*** [[experimental_annotation]]
== Pathways associated ==
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*** [[in-silico_annotation]]
* [[PWY-1042]]
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* [[P341-PWY]]
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* [[PWY66-399]]
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* [[PWY66-373]]
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* [[GLUCONEO-PWY]]
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* [[SUCSYN-PWY]]
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* [[PWY-6901]]
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* [[P124-PWY]]
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* [[GLYCOLYSIS]]
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* [[PWY-6142]]
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* [[CALVIN-PWY]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[P122-PWY]]
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* [[PWY-7003]]
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== External links  ==
 
== External links  ==
{{#set: left end position=60}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=POSITIVE}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
{{#set: right end position=1742}}
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{{#set: ec number=EC-1.3.3.6}}
{{#set: centisome position=3.2258062    }}
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{{#set: gene associated=Tiso_gene_18566}}
{{#set: reaction associated=1.2.1.13-RXN|GAPDHSYNEC-RXN|GAPOXNPHOSPHN-RXN|TRIOSEPISOMERIZATION-RXN}}
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{{#set: in pathway=PWY-7606}}
{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-399|PWY66-373|GLUCONEO-PWY|SUCSYN-PWY|PWY-6901|P124-PWY|GLYCOLYSIS|PWY-6142|CALVIN-PWY|ANAGLYCOLYSIS-PWY|PWY-5484|P185-PWY|P122-PWY|PWY-7003}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:42, 10 January 2018

Reaction RXN-16134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 (6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] => 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] + 1 hydrogen peroxide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links