Difference between revisions of "CPD-14276"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CIT CIT] == * smiles: ** C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-] * inchi key: ** InChIKey=KRKNYBC...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7984 RXN-7984] == * direction: ** LEFT-TO-RIGHT * common name: ** violaxanthin_de-epoxidase **...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CIT CIT] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7984 RXN-7984] ==
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* smiles:
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* direction:
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** C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K
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* common name:
 
* common name:
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** citrate
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** violaxanthin_de-epoxidase
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* molecular weight:
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** violaxanthin_de-_chloroplast
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** 189.101   
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* Synonym(s):
 
* Synonym(s):
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** citr
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** VDE
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** cit
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** citric acid
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** 2-hydroxy-1,2,3-propanetricarboxylic acid
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[CSm]]
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** 1 [[CPD1F-133]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ASCORBATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
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* [[CSx]]
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* With common name(s):
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* [[CITSYN-RXN]]
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** 1 violaxanthin[c] '''+''' 1 H+[c] '''+''' 1 L-ascorbate[c] '''=>''' 1 H2O[c] '''+''' 1 antheraxanthin[c] '''+''' 1 L-dehydro-ascorbate[c]
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== Reaction(s) of unknown directionality ==
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* [[RXN-14047]]
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== Genes associated with this reaction  ==
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* [[OAACITtm]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[AKGCITtm]]
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* [[Tiso_gene_1275]]
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* [[ACONITATEDEHYDR-RXN]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16523]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5666]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 77-92-9
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* RHEA:
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* METABOLIGHTS : MTBLC16947
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15353 15353]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=31348 31348]
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** [http://www.genome.jp/dbget-bin/www_bget?R07178 R07178]
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* KNAPSACK : C00007619
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB00094
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{{#set: common name=violaxanthin_de-epoxidase}}
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* LIGAND-CPD:
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{{#set: common name=violaxanthin_de-_chloroplast}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00158 C00158]
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{{#set: common name=VDE}}
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* CHEMSPIDER:
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{{#set: gene associated=Tiso_gene_1275|Tiso_gene_16523|Tiso_gene_5666}}
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** [http://www.chemspider.com/Chemical-Structure.29081.html 29081]
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{{#set: in pathway=PWY-5945}}
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* CHEBI:
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{{#set: reconstruction category=orthology}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16947 16947]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : cit
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{{#set: reconstruction source=esiliculosus}}
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{{#set: smiles=C(=O)([O-])CC(C(=O)[O-])(O)CC(=O)[O-]}}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=KRKNYBCHXYNGOX-UHFFFAOYSA-K}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=citrate}}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: molecular weight=189.101    }}
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{{#set: common name=citr|cit|citric acid|2-hydroxy-1,2,3-propanetricarboxylic acid}}
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{{#set: produced by=CSm|CSx|CITSYN-RXN}}
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{{#set: consumed or produced by=RXN-14047|OAACITtm|AKGCITtm|ACONITATEDEHYDR-RXN}}
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Revision as of 16:44, 10 January 2018

Reaction RXN-7984

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • violaxanthin_de-epoxidase
    • violaxanthin_de-_chloroplast
  • Synonym(s):
    • VDE

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5945, zeaxanthin, antheraxanthin and violaxanthin interconversion: PWY-5945
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-14276&oldid=14361"