Difference between revisions of "CPDQT-39"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARP NARP] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotinamide ribonucleotide phosphohy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARP NARP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** thiolase
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** nicotinamide ribonucleotide phosphohydrolase
** acetyl-_c-acetyltransferase
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** 3-ketoacyl-_thiolase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CO-A]][c] '''+''' 1 [[CPD0-2123]][c] '''=>''' 1 [[CPD-196]][c] '''+''' 1 [[ACETYL-COA]][c]
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** 1.0 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 1.0 [[WATER]][c] '''=>''' 1.0 [[NICOTINAMIDE_RIBOSE]][c] '''+''' 1.0 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1 coenzyme A[c] '''+''' 1 3-oxodecanoyl-CoA[c] '''=>''' 1 octanoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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** 1.0 β-nicotinamide D-ribonucleotide[c] '''+''' 1.0 H2O[c] '''=>''' 1.0 1-(β-D ribofuranosyl)nicotinamide[c] '''+''' 1.0 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_3856]]
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* [[Tiso_gene_5911]]
** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16181]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
 
** [[pantograph]]-[[creinhardtii]]
* [[Tiso_gene_17451]]
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[creinhardtii]]
 
*** [[creinhardtii]]
*** [[athaliana]]
 
*** [[esiliculosus]]
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
*** [[experimental_annotation]]
 
*** [[in-silico_annotation]]
 
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31089 31089]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R03778 R03778]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=thiolase}}
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{{#set: common name=nicotinamide ribonucleotide phosphohydrolase}}
{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: gene associated=Tiso_gene_5911}}
{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: in pathway=}}
{{#set: ec number=EC-2.3.1.16}}
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{{#set: gene associated=Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_15327|Tiso_gene_10116|Tiso_gene_16181|Tiso_gene_17451}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
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{{#set: reconstruction source=creinhardtii}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:45, 10 January 2018

Reaction NARP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nicotinamide ribonucleotide phosphohydrolase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links