Difference between revisions of "RXN-12518"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** panto...")
 
(Created page with "Category:Gene == Gene Tiso_gene_20539 == * left end position: ** 38 * transcription direction: ** NEGATIVE * right end position: ** 1130 * centisome position: ** 3.2478635...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PANTOTHENATE-KIN-RXN PANTOTHENATE-KIN-RXN] ==
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== Gene Tiso_gene_20539 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 38
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* common name:
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* transcription direction:
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** pantothenate_kinase_isoform_1
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.1.33 EC-2.7.1.33]
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** 1130
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* centisome position:
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** 3.2478635   
 
* Synonym(s):
 
* Synonym(s):
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** type III pantothenate kinase
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[PANTOTHENATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[4-P-PANTOTHENATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 ATP[c] '''+''' 1 (R)-pantothenate[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 (R)-4'-phosphopantothenate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_4468]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4467]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3961]], phosphopantothenate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3961 PWY-3961]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[COA-PWY-1]], coenzyme A biosynthesis II (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY-1 COA-PWY-1]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=38}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16373 16373]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1130}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03018 R03018]
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{{#set: centisome position=3.2478635    }}
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* UNIPROT:
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P0A6I3 P0A6I3]
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** [http://www.uniprot.org/uniprot/Q9CFM3 Q9CFM3]
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** [http://www.uniprot.org/uniprot/P44793 P44793]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pantothenate_kinase_isoform_1}}
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{{#set: ec number=EC-2.7.1.33}}
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{{#set: common name=type III pantothenate kinase}}
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{{#set: gene associated=Tiso_gene_4468|Tiso_gene_4467}}
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{{#set: in pathway=PANTO-PWY|PWY-3961|COA-PWY-1}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:47, 10 January 2018

Gene Tiso_gene_20539

  • left end position:
    • 38
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1130
  • centisome position:
    • 3.2478635
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-12518&oldid=14597"