Difference between revisions of "Tiso gene 4788"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLXG oligosaccha...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8763 == * left end position: ** 4630 * transcription direction: ** POSITIVE * right end position: ** 4767 * centisome position: ** 38.95339...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12399 RXN-12399] ==
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== Gene Tiso_gene_8763 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4630
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* common name:
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* transcription direction:
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** xyloglucan XLXG oligosaccharide β-galactosidase
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** POSITIVE
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** glycoside_hydrolase
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* right end position:
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** polyprotein
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** 4767
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
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** 38.953392   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[CPD-13377]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 1 [[D-galactopyranose]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 XLXG xyloglucan oligosaccharide[c] '''+''' 1 H2O[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 1 D-galactopyranose[c]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12195]]
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* [[Tiso_gene_17558]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-12196]]
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* [[Tiso_gene_12839]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN0-5462]]
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* [[Tiso_gene_1398]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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== Pathways associated ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7184]]
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== Pathways  ==
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* [[PWY-7198]]
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* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
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* [[PWY-6545]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7210]]
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=4630}}
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{{#set: common name=xyloglucan XLXG oligosaccharide β-galactosidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=glycoside_hydrolase}}
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{{#set: right end position=4767}}
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{{#set: common name=polyprotein}}
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{{#set: centisome position=38.953392    }}
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{{#set: ec number=EC-3.2.1.23}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: gene associated=Tiso_gene_17558|Tiso_gene_12839|Tiso_gene_1398}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: in pathway=PWY-6807}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 16:48, 10 January 2018

Gene Tiso_gene_8763

  • left end position:
    • 4630
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4767
  • centisome position:
    • 38.953392
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4788&oldid=14676"