Difference between revisions of "CPD-18076"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** allantoicase...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5901 == * left end position: ** 5949 * transcription direction: ** NEGATIVE * right end position: ** 6950 * centisome position: ** 46.50199...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] ==
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== Gene Tiso_gene_5901 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5949
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* common name:
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* transcription direction:
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** allantoicase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.3.4 EC-3.5.3.4]
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** 6950
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* centisome position:
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** 46.501995   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[6PGLUCONOLACT-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[ALLANTOATE]][c] '''=>''' 1 [[UREA]][c] '''+''' 1 [[CPD-1091]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 allantoate[c] '''=>''' 1 urea[c] '''+''' 1 S-ureidoglycolate[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_15504]]
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* [[P122-PWY]]
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** IN-SILICO_ANNOTATION
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* [[RUMP-PWY]]
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***EC-NUMBER
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* [[OXIDATIVEPENT-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[GLYCOLYSIS-E-D]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5697 PWY-5697]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5949}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11016 11016]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6950}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
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{{#set: centisome position=46.501995    }}
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* UNIPROT:
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{{#set: reaction associated=6PGLUCONOLACT-RXN}}
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** [http://www.uniprot.org/uniprot/P18407 P18407]
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{{#set: pathway associated=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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** [http://www.uniprot.org/uniprot/P25335 P25335]
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** [http://www.uniprot.org/uniprot/Q09913 Q09913]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=allantoicase}}
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{{#set: ec number=EC-3.5.3.4}}
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{{#set: gene associated=Tiso_gene_15504}}
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{{#set: in pathway=PWY-5697}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:49, 10 January 2018

Gene Tiso_gene_5901

  • left end position:
    • 5949
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6950
  • centisome position:
    • 46.501995
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-18076&oldid=14778"