Difference between revisions of "ExchangeSeed IODINE-MOLECULE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.34-RXN 1.1.1.34-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** mitochondrial_car...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4702 CPD-4702] == * smiles: ** CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.34-RXN 1.1.1.34-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4702 CPD-4702] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)1C=2CCC(C)34))))
 +
* inchi key:
 +
** InChIKey=JHIWIFRQJXLNEU-GSQAGGHASA-M
 
* common name:
 
* common name:
−
** ORF
+
** 4α-carboxy-5α-cholesta-8,24-dien-3β-ol
−
** mitochondrial_carrier_protein
+
* molecular weight:
−
* ec number:
+
** 427.646   
−
** [http://enzyme.expasy.org/EC/1.1.1.34 EC-1.1.1.34]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN66-318]]
−
** 2 [[NADP]][c] '''+''' 1 [[MEVALONATE]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[PROTON]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 2 NADP+[c] '''+''' 1 (R)-mevalonate[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 (S)-3-hydroxy-3-methylglutaryl-CoA[c] '''+''' 2 NADPH[c] '''+''' 2 H+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_16182]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17889]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-6174]], mevalonate pathway II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6174 PWY-6174]
+
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-7524]], mevalonate pathway III (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524]
+
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* PUBCHEM:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15989 15989]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90659076 90659076]
−
* LIGAND-RXN:
+
{{#set: smiles=CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)1C=2CCC(C)34))))}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02082 R02082]
+
{{#set: inchi key=InChIKey=JHIWIFRQJXLNEU-GSQAGGHASA-M}}
−
* UNIPROT:
+
{{#set: common name=4&alpha;-carboxy-5&alpha;-cholesta-8,24-dien-3&beta;-ol}}
−
** [http://www.uniprot.org/uniprot/P16393 P16393]
+
{{#set: molecular weight=427.646    }}
−
** [http://www.uniprot.org/uniprot/P14891 P14891]
+
{{#set: consumed by=RXN66-318}}
−
** [http://www.uniprot.org/uniprot/P16237 P16237]
+
−
** [http://www.uniprot.org/uniprot/P20715 P20715]
+
−
** [http://www.uniprot.org/uniprot/Q59468 Q59468]
+
−
** [http://www.uniprot.org/uniprot/Q01237 Q01237]
+
−
** [http://www.uniprot.org/uniprot/Q61671 Q61671]
+
−
** [http://www.uniprot.org/uniprot/Q944T9 Q944T9]
+
−
** [http://www.uniprot.org/uniprot/Q9S9C2 Q9S9C2]
+
−
** [http://www.uniprot.org/uniprot/Q9S999 Q9S999]
+
−
** [http://www.uniprot.org/uniprot/Q9S998 Q9S998]
+
−
** [http://www.uniprot.org/uniprot/Q9S997 Q9S997]
+
−
** [http://www.uniprot.org/uniprot/P04035 P04035]
+
−
** [http://www.uniprot.org/uniprot/P00347 P00347]
+
−
** [http://www.uniprot.org/uniprot/P29058 P29058]
+
−
** [http://www.uniprot.org/uniprot/P29057 P29057]
+
−
** [http://www.uniprot.org/uniprot/Q12577 Q12577]
+
−
** [http://www.uniprot.org/uniprot/Q12649 Q12649]
+
−
** [http://www.uniprot.org/uniprot/Q00583 Q00583]
+
−
** [http://www.uniprot.org/uniprot/Q01559 Q01559]
+
−
** [http://www.uniprot.org/uniprot/P48022 P48022]
+
−
** [http://www.uniprot.org/uniprot/Q43825 Q43825]
+
−
** [http://www.uniprot.org/uniprot/Q43826 Q43826]
+
−
** [http://www.uniprot.org/uniprot/P14773 P14773]
+
−
** [http://www.uniprot.org/uniprot/Q7M4W2 Q7M4W2]
+
−
** [http://www.uniprot.org/uniprot/Q7M4W1 Q7M4W1]
+
−
** [http://www.uniprot.org/uniprot/Q7M4W4 Q7M4W4]
+
−
** [http://www.uniprot.org/uniprot/Q7M4W3 Q7M4W3]
+
−
** [http://www.uniprot.org/uniprot/P48019 P48019]
+
−
** [http://www.uniprot.org/uniprot/Q41454 Q41454]
+
−
** [http://www.uniprot.org/uniprot/Q42506 Q42506]
+
−
** [http://www.uniprot.org/uniprot/Q41455 Q41455]
+
−
** [http://www.uniprot.org/uniprot/Q41456 Q41456]
+
−
** [http://www.uniprot.org/uniprot/Q41458 Q41458]
+
−
** [http://www.uniprot.org/uniprot/P48020 P48020]
+
−
** [http://www.uniprot.org/uniprot/Q9FS01 Q9FS01]
+
−
** [http://www.uniprot.org/uniprot/Q42466 Q42466]
+
−
** [http://www.uniprot.org/uniprot/O48624 O48624]
+
−
** [http://www.uniprot.org/uniprot/O04188 O04188]
+
−
** [http://www.uniprot.org/uniprot/O24594 O24594]
+
−
** [http://www.uniprot.org/uniprot/Q41438 Q41438]
+
−
** [http://www.uniprot.org/uniprot/O64966 O64966]
+
−
** [http://www.uniprot.org/uniprot/O64967 O64967]
+
−
** [http://www.uniprot.org/uniprot/Q03163 Q03163]
+
−
** [http://www.uniprot.org/uniprot/Q39628 Q39628]
+
−
** [http://www.uniprot.org/uniprot/P93514 P93514]
+
−
** [http://www.uniprot.org/uniprot/O08424 O08424]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=mitochondrial_carrier_protein}}
+
−
{{#set: ec number=EC-1.1.1.34}}
+
−
{{#set: gene associated=Tiso_gene_16182|Tiso_gene_17889}}
+
−
{{#set: in pathway=PWY-922|PWY-6174|PWY-7391|PWY-7524}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:49, 10 January 2018

Metabolite CPD-4702

  • smiles:
    • CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)1C=2CCC(C)34))))
  • inchi key:
    • InChIKey=JHIWIFRQJXLNEU-GSQAGGHASA-M
  • common name:
    • 4α-carboxy-5α-cholesta-8,24-dien-3β-ol
  • molecular weight:
    • 427.646
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CCCC(C)[CH]3(CC[CH]4(C2(CC[CH]1(C(C([O-])=O)C(O)CCC(C)1C=2CCC(C)34))))" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ExchangeSeed_IODINE-MOLECULE&oldid=14826"