Difference between revisions of "Tiso gene 14877"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18346 CPD-18346] == * smiles: ** CCCCCCC=CCCCCCCCCCC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** adenylate_kinase...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18346 CPD-18346] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DADPKIN-RXN DADPKIN-RXN] ==
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* smiles:
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* direction:
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** CCCCCCC=CCCCCCCCCCC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HEJOXXLSCAQQGQ-SAIINBSPSA-J
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* common name:
 
* common name:
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** cis-vaccenoyl-CoA
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** ORF
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* molecular weight:
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** adenylate_kinase_domain-containing_protein_1
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** 1027.953   
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** nucleoside_diphosphate_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
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** (Z)-octadec-11-enoyl CoA
 
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** (Z)-11-octadecenoic acyl-CoA
 
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** cis-11-octadecenoic acyl-CoA
 
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** cis-octadec-11-enoic acyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17011]]
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* With identifiers:
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* [[RXN-17010]]
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** 1 [[DADP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DATP]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-17784]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 dADP[c] '''+''' 1 ATP[c] '''=>''' 1 dATP[c] '''+''' 1 ADP[c]
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* [[RXN0-7238]]
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* [[FACOAL18111Z]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17272]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17271]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9290]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_195]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18224]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16529]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
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* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7220 PWY-7220]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7224]], purine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7224 PWY-7224]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7227]], adenosine deoxyribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7227 PWY-7227]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
 +
** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71668355 71668355]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=75121 75121]
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** [http://www.genome.jp/dbget-bin/www_bget?R01137 R01137]
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{{#set: smiles=CCCCCCC=CCCCCCCCCCC(=O)SCCNC(=O)CCNC(C(O)C(C)(C)COP([O-])(=O)OP([O-])(=O)OCC1(C(OP(=O)([O-])[O-])C(O)C(O1)N3(C=NC2(C(N)=NC=NC=23))))=O}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: inchi key=InChIKey=HEJOXXLSCAQQGQ-SAIINBSPSA-J}}
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{{#set: common name=ORF}}
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{{#set: common name=cis-vaccenoyl-CoA}}
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{{#set: common name=adenylate_kinase_domain-containing_protein_1}}
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{{#set: molecular weight=1027.953    }}
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{{#set: common name=nucleoside_diphosphate_kinase}}
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{{#set: common name=(Z)-octadec-11-enoyl CoA|(Z)-11-octadecenoic acyl-CoA|cis-11-octadecenoic acyl-CoA|cis-octadec-11-enoic acyl-CoA}}
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{{#set: ec number=EC-2.7.4.6}}
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{{#set: consumed by=RXN-17011|RXN-17010|RXN-17784}}
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{{#set: gene associated=Tiso_gene_17272|Tiso_gene_17271|Tiso_gene_9290|Tiso_gene_195|Tiso_gene_18224|Tiso_gene_16529}}
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{{#set: produced by=RXN0-7238|FACOAL18111Z}}
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{{#set: in pathway=PWY-7220|PWY-7224|PWY-7227}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:50, 10 January 2018

Reaction DADPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • adenylate_kinase_domain-containing_protein_1
    • nucleoside_diphosphate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dADP[c] + 1 ATP[c] => 1 dATP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7220, adenosine deoxyribonucleotides de novo biosynthesis II: PWY-7220
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7224, purine deoxyribonucleosides salvage: PWY-7224
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-7227, adenosine deoxyribonucleotides de novo biosynthesis: PWY-7227
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links








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