Difference between revisions of "CPD1G-1346"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13533 CPD-13533] == * smiles: ** CCC(CC(SCCNC(CCNC(C(C(COP(=O)([O-])OP(OCC1(OC(C(C1OP([O-])...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10625 RXN-10625] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13533 CPD-13533] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** CCC(CC(SCCNC(CCNC(C(C(COP(=O)([O-])OP(OCC1(OC(C(C1OP([O-])([O-])=O)O)N3(C=NC2(C(=NC=NC=23)N))))([O-])=O)(C)C)O)=O)=O)=O)O
 +
* inchi key:
 +
** InChIKey=YYGYPCRWZMLSGK-ORUMCERNSA-J
 
* common name:
 
* common name:
** geranylgeranyl_diphosphate_reductase
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** (R)-3-hydroxyvaleryl-CoA
* ec number:
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* molecular weight:
** [http://enzyme.expasy.org/EC/1.3.1.83 EC-1.3.1.83]
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** 863.619   
 
* Synonym(s):
 
* Synonym(s):
 +
** D-β-hydroxyvaleryl-CoA
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 3 [[PROTON]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 3 [[NADPH]][c] '''=>''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 3 [[NADP]][c]
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== Reaction(s) of unknown directionality ==
* With common name(s):
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* [[RXN-12560]]
** 3 H+[c] '''+''' 1 geranylgeranyl diphosphate[c] '''+''' 3 NADPH[c] '''=>''' 1 phytyl diphosphate[c] '''+''' 3 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2613]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
* RHEA:
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* PUBCHEM:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26229 26229]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54758578 54758578]
* LIGAND-RXN:
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{{#set: smiles=CCC(CC(SCCNC(CCNC(C(C(COP(=O)([O-])OP(OCC1(OC(C(C1OP([O-])([O-])=O)O)N3(C=NC2(C(=NC=NC=23)N))))([O-])=O)(C)C)O)=O)=O)=O)O}}
** [http://www.genome.jp/dbget-bin/www_bget?R02063 R02063]
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{{#set: inchi key=InChIKey=YYGYPCRWZMLSGK-ORUMCERNSA-J}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=(R)-3-hydroxyvaleryl-CoA}}
{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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{{#set: molecular weight=863.619    }}
{{#set: ec number=EC-1.3.1.83}}
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{{#set: common name=D-β-hydroxyvaleryl-CoA}}
{{#set: gene associated=Tiso_gene_2613}}
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{{#set: consumed or produced by=RXN-12560}}
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:51, 10 January 2018

Metabolite CPD-13533

  • smiles:
    • CCC(CC(SCCNC(CCNC(C(C(COP(=O)([O-])OP(OCC1(OC(C(C1OP([O-])([O-])=O)O)N3(C=NC2(C(=NC=NC=23)N))))([O-])=O)(C)C)O)=O)=O)=O)O
  • inchi key:
    • InChIKey=YYGYPCRWZMLSGK-ORUMCERNSA-J
  • common name:
    • (R)-3-hydroxyvaleryl-CoA
  • molecular weight:
    • 863.619
  • Synonym(s):
    • D-β-hydroxyvaleryl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC(CC(SCCNC(CCNC(C(C(COP(=O)([O-])OP(OCC1(OC(C(C1OP([O-])([O-])=O)O)N3(C=NC2(C(=NC=NC=23)N))))([O-])=O)(C)C)O)=O)=O)=O)O" cannot be used as a page name in this wiki.