Difference between revisions of "ARSENATE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] == * smiles: ** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O * inchi key: **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] == * direction: ** REVERSIBLE * common name: ** pentafunctional_protein...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DCMP DCMP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.19-RXN 2.5.1.19-RXN] ==
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* smiles:
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* direction:
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** C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O
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** REVERSIBLE
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* inchi key:
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** InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L
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* common name:
 
* common name:
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** dCMP
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** pentafunctional_protein
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* molecular weight:
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* ec number:
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** 305.183   
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** [http://enzyme.expasy.org/EC/2.5.1.19 EC-2.5.1.19]
 
* Synonym(s):
 
* Synonym(s):
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** 2'-deoxycytidine 5'-monophosphate
 
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** deoxycytidylate
 
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** deoxycytidylic acid
 
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** deoxycytidine monophosphate
 
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** 2'-deoxycytidine 5'-phosphate
 
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** deoxycytidine-phosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[ATDCM]]
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* With identifiers:
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* [[RXN-7913]]
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** 1 [[SHIKIMATE-5P]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c]
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* [[DCMP-DEAMINASE-RXN]]
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* With common name(s):
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* [[ATDCMf]]
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** 1 shikimate 3-phosphate[c] '''+''' 1 phosphoenolpyruvate[c] '''<=>''' 1 phosphate[c] '''+''' 1 5-enolpyruvoyl-shikimate 3-phosphate[c]
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== Reaction(s) known to produce the compound ==
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* [[DCTP-PYROPHOSPHATASE-RXN]]
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== Genes associated with this reaction  ==
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* [[DCYTPT]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14198]]
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* [[Tiso_gene_5752]]
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* [[RXN-14187]]
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** IN-SILICO_ANNOTATION
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== Reaction(s) of unknown directionality ==
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***EC-NUMBER
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* [[Tiso_gene_5753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 1032-65-1
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* RHEA:
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* METABOLIGHTS : MTBLC57566
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21256 21256]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058169 7058169]
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** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
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* HMDB : HMDB01202
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P22299 P22299]
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** [http://www.genome.jp/dbget-bin/www_bget?C00239 C00239]
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.chemspider.com/Chemical-Structure.5414501.html 5414501]
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** [http://www.uniprot.org/uniprot/P22487 P22487]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P52312 P52312]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57566 57566]
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** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
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* BIGG : dcmp
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** [http://www.uniprot.org/uniprot/Q03421 Q03421]
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{{#set: smiles=C(C2(C(CC(N1(C(N=C(C=C1)N)=O))O2)O))OP([O-])([O-])=O}}
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** [http://www.uniprot.org/uniprot/P19786 P19786]
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{{#set: inchi key=InChIKey=NCMVOABPESMRCP-SHYZEUOFSA-L}}
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** [http://www.uniprot.org/uniprot/P17688 P17688]
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{{#set: common name=dCMP}}
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** [http://www.uniprot.org/uniprot/P24497 P24497]
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{{#set: molecular weight=305.183    }}
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** [http://www.uniprot.org/uniprot/P23981 P23981]
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{{#set: common name=2'-deoxycytidine 5'-monophosphate|deoxycytidylate|deoxycytidylic acid|deoxycytidine monophosphate|2'-deoxycytidine 5'-phosphate|deoxycytidine-phosphate}}
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** [http://www.uniprot.org/uniprot/P23281 P23281]
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{{#set: consumed by=ATDCM|RXN-7913|DCMP-DEAMINASE-RXN|ATDCMf}}
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** [http://www.uniprot.org/uniprot/Q04570 Q04570]
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{{#set: produced by=DCTP-PYROPHOSPHATASE-RXN|DCYTPT|RXN-14198|RXN-14187}}
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** [http://www.uniprot.org/uniprot/P43905 P43905]
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** [http://www.uniprot.org/uniprot/Q59975 Q59975]
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** [http://www.uniprot.org/uniprot/P12421 P12421]
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** [http://www.uniprot.org/uniprot/P07637 P07637]
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** [http://www.uniprot.org/uniprot/P19688 P19688]
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** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
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** [http://www.uniprot.org/uniprot/P11043 P11043]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-2.5.1.19}}
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{{#set: gene associated=Tiso_gene_5752|Tiso_gene_5753}}
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{{#set: in pathway=PWY-6163}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:51, 10 January 2018

Reaction 2.5.1.19-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ARSENATE&oldid=14912"