Difference between revisions of "RXN-7698"

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(Created page with "Category:Gene == Gene Tiso_gene_4555 == * left end position: ** 9204 * transcription direction: ** POSITIVE * right end position: ** 10473 * centisome position: ** 62.4804...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** threonine_syntha...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4555 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THRESYN-RXN THRESYN-RXN] ==
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* left end position:
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* direction:
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** 9204
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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** threonine_synthase
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** 10473
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.3.1 EC-4.2.3.1]
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** 62.480484   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-13733]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''=>''' 1 [[THR]][c] '''+''' 1 [[Pi]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 O-phospho-L-homoserine[c] '''=>''' 1 L-threonine[c] '''+''' 1 phosphate[c]
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* [[PWY-7119]]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2614]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_418]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_419]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12871]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-THRESYN-PWY HOMOSER-THRESYN-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=9204}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10840 10840]
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{{#set: right end position=10473}}
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* LIGAND-RXN:
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{{#set: centisome position=62.480484    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01466 R01466]
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{{#set: reaction associated=RXN-13733}}
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* UNIPROT:
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{{#set: pathway associated=PWY-7119}}
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** [http://www.uniprot.org/uniprot/P04990 P04990]
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** [http://www.uniprot.org/uniprot/Q9Y9K2 Q9Y9K2]
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** [http://www.uniprot.org/uniprot/O28953 O28953]
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** [http://www.uniprot.org/uniprot/P66902 P66902]
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** [http://www.uniprot.org/uniprot/O59293 O59293]
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** [http://www.uniprot.org/uniprot/O66864 O66864]
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** [http://www.uniprot.org/uniprot/Q9PPA8 Q9PPA8]
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** [http://www.uniprot.org/uniprot/O58587 O58587]
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** [http://www.uniprot.org/uniprot/Q9V0P1 Q9V0P1]
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** [http://www.uniprot.org/uniprot/Q9V190 Q9V190]
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** [http://www.uniprot.org/uniprot/O26354 O26354]
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** [http://www.uniprot.org/uniprot/O29700 O29700]
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** [http://www.uniprot.org/uniprot/Q9WZ16 Q9WZ16]
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** [http://www.uniprot.org/uniprot/Q9UZV8 Q9UZV8]
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** [http://www.uniprot.org/uniprot/Q9JU91 Q9JU91]
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** [http://www.uniprot.org/uniprot/Q9CDV8 Q9CDV8]
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** [http://www.uniprot.org/uniprot/P44503 P44503]
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** [http://www.uniprot.org/uniprot/Q58860 Q58860]
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** [http://www.uniprot.org/uniprot/O66740 O66740]
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** [http://www.uniprot.org/uniprot/O50114 O50114]
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** [http://www.uniprot.org/uniprot/Q9YBW2 Q9YBW2]
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** [http://www.uniprot.org/uniprot/P23669 P23669]
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** [http://www.uniprot.org/uniprot/P27735 P27735]
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** [http://www.uniprot.org/uniprot/Q00063 Q00063]
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** [http://www.uniprot.org/uniprot/P74193 P74193]
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** [http://www.uniprot.org/uniprot/P73711 P73711]
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** [http://www.uniprot.org/uniprot/P16120 P16120]
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** [http://www.uniprot.org/uniprot/P00934 P00934]
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** [http://www.uniprot.org/uniprot/P29363 P29363]
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** [http://www.uniprot.org/uniprot/Q9S7B5 Q9S7B5]
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** [http://www.uniprot.org/uniprot/P45837 P45837]
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** [http://www.uniprot.org/uniprot/Q42598 Q42598]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=threonine_synthase}}
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{{#set: ec number=EC-4.2.3.1}}
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{{#set: gene associated=Tiso_gene_2614|Tiso_gene_418|Tiso_gene_419|Tiso_gene_12871}}
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{{#set: in pathway=HOMOSER-THRESYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:51, 10 January 2018

Reaction THRESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • threonine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 O-phospho-L-homoserine[c] => 1 L-threonine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








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