Difference between revisions of "RXN-15468"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcA-Gal-Gal-Xyl-Proteins GlcA-Gal-Gal-Xyl-Proteins] == * common name: ** a [protein]-3-O-(&bet...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** lys...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GlcA-Gal-Gal-Xyl-Proteins GlcA-Gal-Gal-Xyl-Proteins] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine
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** lysophospholipase
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.5 EC-3.1.1.5]
 
* Synonym(s):
 
* Synonym(s):
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** 3-β-D-glucosyluronate-3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]
 
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** β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]
 
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** β-D-glucuronosyl-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]
 
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** a [protein]-3-O-(β-D-glucuronosyl-(1→3)-β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.4.1.223-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[2-Lysophosphatidylcholines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-GLYCERO-PHOSPHORYLCHOLINE]][c] '''+''' 1 [[Carboxylates]][c] '''+''' 1 [[PROTON]][c]
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* [[2.4.1.135-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a 1-acyl-sn-glycero-3-phosphocholine[c] '''+''' 1 H2O[c] '''=>''' 1 sn-glycero-3-phosphocholine[c] '''+''' 1 a carboxylate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_334]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12479]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2505]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12478]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15692]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8353]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12375]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
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* [[Tiso_gene_20565]]
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** [[pantograph]]-[[esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a [protein]-3-O-(β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine}}
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* RHEA:
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{{#set: common name=3-β-D-glucosyluronate-3-β-D-galactosyl-4-β-D-galactosyl-O-β-D-xylosyl-[protein]|β-D-glucosyluronate-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[proteoglycan]|β-D-glucuronosyl-(1->3)-β-D-galactosyl-(1->3)-β-D-galactosyl-(1->4)-β-D-xylosyl-[core protein]|a [protein]-3-O-(β-D-glucuronosyl-(1→3)-β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15177 15177]
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{{#set: consumed by=2.4.1.223-RXN}}
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* LIGAND-RXN:
−
{{#set: produced by=2.4.1.135-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02746 R02746]
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** [http://www.genome.jp/dbget-bin/www_bget?R07291 R07291]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/O07427 O07427]
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** [http://www.uniprot.org/uniprot/Q7M3V3 Q7M3V3]
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** [http://www.uniprot.org/uniprot/P07000 P07000]
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** [http://www.uniprot.org/uniprot/P0ADA1 P0ADA1]
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** [http://www.uniprot.org/uniprot/P39457 P39457]
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** [http://www.uniprot.org/uniprot/Q03674 Q03674]
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** [http://www.uniprot.org/uniprot/P53541 P53541]
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** [http://www.uniprot.org/uniprot/P78854 P78854]
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** [http://www.uniprot.org/uniprot/O42970 O42970]
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** [http://www.uniprot.org/uniprot/Q9P327 Q9P327]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=lysophospholipase}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.1.5}}
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{{#set: gene associated=Tiso_gene_334|Tiso_gene_19778|Tiso_gene_12479|Tiso_gene_2505|Tiso_gene_12478|Tiso_gene_15692|Tiso_gene_8353|Tiso_gene_12375|Tiso_gene_20565}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:52, 10 January 2018

Reaction LYSOPHOSPHOLIPASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lysophospholipase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-15468&oldid=15000"