Difference between revisions of "CPD-7409"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_12496 == * left end position: ** 27 * transcription direction: ** NEGATIVE * right end position: ** 4124 * centisome position: ** 0.3888808...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** PSase ** geranylgerany...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == |
− | * | + | * direction: |
− | + | ** LEFT-TO-RIGHT | |
− | + | ||
− | ** | + | |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
* Synonym(s): | * Synonym(s): | ||
+ | ** PSase | ||
+ | ** geranylgeranyl-diphosphate geranylgeranyltransferase | ||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | * | + | ** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[CPD-464]][c] '''+''' 1 [[PPI]][c] |
− | ** | + | * With common name(s): |
− | * | + | ** 2 geranylgeranyl diphosphate[c] '''=>''' 1 prephytoene diphosphate[c] '''+''' 1 diphosphate[c] |
− | ** | + | |
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_15914]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
− | == Pathways | + | == Pathways == |
− | * [[ | + | * [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287] |
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * [[orthology]]: | ||
+ | ** [[pantograph]]: | ||
+ | *** [[synechocystis]] | ||
+ | *** [[esiliculosus]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22296 22296] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065] |
− | {{#set: | + | * UNIPROT: |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/P53609 P53609] |
+ | ** [http://www.uniprot.org/uniprot/P37295 P37295] | ||
+ | ** [http://www.uniprot.org/uniprot/P22872 P22872] | ||
+ | ** [http://www.uniprot.org/uniprot/P53610 P53610] | ||
+ | ** [http://www.uniprot.org/uniprot/P53612 P53612] | ||
+ | ** [http://www.uniprot.org/uniprot/P17056 P17056] | ||
+ | ** [http://www.uniprot.org/uniprot/P49293 P49293] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}} | ||
+ | {{#set: gene associated=Tiso_gene_15914}} | ||
+ | {{#set: in pathway=PWY-6287|PWY-6475}} | ||
+ | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction tool=pantograph}} | ||
+ | {{#set: reconstruction source=synechocystis|esiliculosus}} |
Revision as of 16:52, 10 January 2018
Contents
Reaction 2.5.1.32-RXN
- direction:
- LEFT-TO-RIGHT
- Synonym(s):
- PSase
- geranylgeranyl-diphosphate geranylgeranyltransferase
Reaction Formula
- With identifiers:
- 2 GERANYLGERANYL-PP[c] => 1 CPD-464[c] + 1 PPI[c]
- With common name(s):
- 2 geranylgeranyl diphosphate[c] => 1 prephytoene diphosphate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- PWY-6287, neurosporene biosynthesis: PWY-6287
- 4 reactions found over 5 reactions in the full pathway
- PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
- 5 reactions found over 8 reactions in the full pathway
Reconstruction information
External links