Difference between revisions of "CPD-15633"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] == * direction: ** LEFT-TO-RIGHT * common name: ** digalactosyldiacylglycerol_sy...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18337 == * left end position: ** 918 * transcription direction: ** NEGATIVE * right end position: ** 2858 * centisome position: ** 29.80519...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1225 RXN-1225] ==
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== Gene Tiso_gene_18337 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 918
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* common name:
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* transcription direction:
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** digalactosyldiacylglycerol_synthase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.1.241 EC-2.4.1.241]
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** 2858
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* centisome position:
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** 29.805195   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PYRROLINECARBDEHYDROG-RXN]]
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** 1 [[CPD-14553]][c] '''+''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''=>''' 1 [[Galactosyl-galactosyl-diacyl-glycerols]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 UDP-α-D-galactose[c] '''+''' 1 a 1,2-diacyl-3-O-(β-D-galactopyranosyl)-sn-glycerol[c] '''=>''' 1 an α,β-digalactosyldiacylglycerol[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-14116]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_106]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***AUTOMATED-NAME-MATCH
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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== Pathways associated ==
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* [[Tiso_gene_11479]]
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* [[PROUT-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[ARGASEDEG-PWY]]
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***EC-NUMBER
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* [[PWY-6853]]
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* [[Tiso_gene_2142]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7666]], galactolipid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7666 PWY-7666]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=918}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10520 10520]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2858}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04469 R04469]
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{{#set: centisome position=29.805195    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=PYRROLINECARBDEHYDROG-RXN|RXN-14116}}
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{{#set: common name=digalactosyldiacylglycerol_synthase}}
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{{#set: pathway associated=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
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{{#set: ec number=EC-2.4.1.241}}
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{{#set: gene associated=Tiso_gene_106|Tiso_gene_11479|Tiso_gene_2142}}
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{{#set: in pathway=PWY-401|PWY-7666}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 16:53, 10 January 2018

Gene Tiso_gene_18337

  • left end position:
    • 918
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2858
  • centisome position:
    • 29.805195
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-15633&oldid=15149"