Difference between revisions of "Tiso gene 10446"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] == * direction: ** REVERSIBLE * common name: ** cysteine_synthase ** cog00...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACSERLY-RXN ACSERLY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** cysteine_synthase
+
−
** cog0031:_cysteine_synthase
+
−
** cysteine
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
+
** [http://enzyme.expasy.org/EC/2.4.1.257 EC-2.4.1.257]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ACETYLSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[CYS]][c] '''+''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-5161]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 O-acetyl-L-serine[c] '''+''' 1 hydrogen sulfide[c] '''<=>''' 1 L-cysteine[c] '''+''' 1 acetate[c] '''+''' 1 H+[c]
+
** 1 &alpha;-D-Man-(1&rarr;3)-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol[c] '''+''' 1 GDP-&alpha;-D-mannose[c] '''=>''' 1 &alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 GDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_6110]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_12184]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_2283]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_819]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_17043]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_7852]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''19''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
 
−
** [[pantograph]]:
 
−
*** [[creinhardtii]]
 
−
*** [[synechocystis]]
 
−
*** [[esiliculosus]]
 
−
* [[manual]]:
 
−
** [[primary_network]]
 
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14829 14829]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00897 R00897]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P31300 P31300]
+
{{#set: ec number=EC-2.4.1.257}}
−
** [http://www.uniprot.org/uniprot/Q43153 Q43153]
+
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
−
** [http://www.uniprot.org/uniprot/O67507 O67507]
+
−
** [http://www.uniprot.org/uniprot/P47998 P47998]
+
−
** [http://www.uniprot.org/uniprot/Q9V1Q3 Q9V1Q3]
+
−
** [http://www.uniprot.org/uniprot/Q9RW80 Q9RW80]
+
−
** [http://www.uniprot.org/uniprot/P56067 P56067]
+
−
** [http://www.uniprot.org/uniprot/P63873 P63873]
+
−
** [http://www.uniprot.org/uniprot/Q9CI26 Q9CI26]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMW6 Q9ZMW6]
+
−
** [http://www.uniprot.org/uniprot/P45040 P45040]
+
−
** [http://www.uniprot.org/uniprot/Q9WZD3 Q9WZD3]
+
−
** [http://www.uniprot.org/uniprot/Q9CHF0 Q9CHF0]
+
−
** [http://www.uniprot.org/uniprot/P0A534 P0A534]
+
−
** [http://www.uniprot.org/uniprot/P71128 P71128]
+
−
** [http://www.uniprot.org/uniprot/O05393 O05393]
+
−
** [http://www.uniprot.org/uniprot/O34476 O34476]
+
−
** [http://www.uniprot.org/uniprot/Q9JQL6 Q9JQL6]
+
−
** [http://www.uniprot.org/uniprot/P38076 P38076]
+
−
** [http://www.uniprot.org/uniprot/Q7M1J2 Q7M1J2]
+
−
** [http://www.uniprot.org/uniprot/P29848 P29848]
+
−
** [http://www.uniprot.org/uniprot/P32260 P32260]
+
−
** [http://www.uniprot.org/uniprot/Q00834 Q00834]
+
−
** [http://www.uniprot.org/uniprot/Q43317 Q43317]
+
−
** [http://www.uniprot.org/uniprot/P47999 P47999]
+
−
** [http://www.uniprot.org/uniprot/Q43726 Q43726]
+
−
** [http://www.uniprot.org/uniprot/P80608 P80608]
+
−
** [http://www.uniprot.org/uniprot/Q59447 Q59447]
+
−
** [http://www.uniprot.org/uniprot/P53206 P53206]
+
−
** [http://www.uniprot.org/uniprot/P37887 P37887]
+
−
** [http://www.uniprot.org/uniprot/Q59529 Q59529]
+
−
** [http://www.uniprot.org/uniprot/P0A1E3 P0A1E3]
+
−
** [http://www.uniprot.org/uniprot/P0ABK5 P0ABK5]
+
−
** [http://www.uniprot.org/uniprot/P16703 P16703]
+
−
** [http://www.uniprot.org/uniprot/O81154 O81154]
+
−
** [http://www.uniprot.org/uniprot/O81155 O81155]
+
−
** [http://www.uniprot.org/uniprot/O81523 O81523]
+
−
** [http://www.uniprot.org/uniprot/Q93244 Q93244]
+
−
** [http://www.uniprot.org/uniprot/O45679 O45679]
+
−
** [http://www.uniprot.org/uniprot/Q9S2H1 Q9S2H1]
+
−
** [http://www.uniprot.org/uniprot/P87131 P87131]
+
−
** [http://www.uniprot.org/uniprot/Q9XDU7 Q9XDU7]
+
−
** [http://www.uniprot.org/uniprot/Q9UWP0 Q9UWP0]
+
−
** [http://www.uniprot.org/uniprot/O32978 O32978]
+
−
** [http://www.uniprot.org/uniprot/Q9RAS8 Q9RAS8]
+
−
** [http://www.uniprot.org/uniprot/Q9S757 Q9S757]
+
−
** [http://www.uniprot.org/uniprot/Q9S6Z7 Q9S6Z7]
+
−
** [http://www.uniprot.org/uniprot/Q43725 Q43725]
+
−
** [http://www.uniprot.org/uniprot/Q9SMY4 Q9SMY4]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=cysteine_synthase}}
+
−
{{#set: common name=cog0031:_cysteine_synthase}}
+
−
{{#set: common name=cysteine}}
+
−
{{#set: ec number=EC-2.5.1.47}}
+
−
{{#set: gene associated=Tiso_gene_6110|Tiso_gene_12184|Tiso_gene_2283|Tiso_gene_819|Tiso_gene_17043|Tiso_gene_7852}}
+
−
{{#set: in pathway=CYSTSYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:54, 10 January 2018

Reaction RXN-5463

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 GDP-α-D-mannose[c] => 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 H+[c] + 1 GDP[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10446&oldid=15185"