Difference between revisions of "Tiso gene 13177"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8272 == * left end position: ** 4586 * transcription direction: ** POSITIVE * right end position: ** 7394 * centisome position: ** 44.12161...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] ==
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== Gene Tiso_gene_8272 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4586
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
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** POSITIVE
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* right end position:
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** 7394
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* centisome position:
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** 44.12161   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACOA120or]]
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** 1 [[2-2-N-linked-Glycan]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[24-2-N-linked-Glycan]][c] '''+''' 1 [[PROTON]][c]
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** [[pantograph]]-[[creinhardtii]]
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* With common name(s):
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* [[ACOA140or]]
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** 1 N4-{N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,3)-[N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1,4)-N-acetyl-β-D-glucosaminyl-(1,4)-N-acetyl-β-D-glucosaminyl}-protein-L-asparagine[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 UDP[c] '''+''' 1 [(2,4),(2)]-N-linked glycan[c] '''+''' 1 H+[c]
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** [[pantograph]]-[[creinhardtii]]
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* [[ACOA160or]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ACOA40or]]
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* [[Tiso_gene_2381]]
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** [[pantograph]]-[[creinhardtii]]
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* [[ACOA80or]]
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** [[pantograph]]-[[creinhardtii]]
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* [[ACYLCOADEHYDROG-RXN]]
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** in-silico_annotation
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***automated-name-match
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** [[pantograph]]-[[esiliculosus]]
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PPCOAOm]]
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** [[pantograph]]-[[creinhardtii]]
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* [[RXN-14193]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14229]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14262]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14264]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14278]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[RXN-17775]]
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* [[PWY-7426]], mannosyl-glycoprotein N-acetylglucosaminyltransferases: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
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** in-silico_annotation
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** '''1''' reactions found over '''7''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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* [[RXN-17779]]
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* [[orthology]]:
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** in-silico_annotation
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** [[pantograph]]:
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***automated-name-match
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*** [[esiliculosus]]
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* [[RXN-17783]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17784]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17788]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17792]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17796]]
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** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[FAO-PWY]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=4586}}
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** [http://www.uniprot.org/uniprot/P23336 P23336]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7394}}
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{{#set: ec number=EC-2.4.1.145}}
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{{#set: centisome position=44.12161    }}
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{{#set: gene associated=Tiso_gene_2381}}
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{{#set: reaction associated=ACOA120or|ACOA140or|ACOA160or|ACOA40or|ACOA80or|ACYLCOADEHYDROG-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|PPCOAOm|RXN-14193|RXN-14229|RXN-14262|RXN-14264|RXN-14278|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: in pathway=PWY-7426}}
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{{#set: pathway associated=FAO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 16:55, 10 January 2018

Gene Tiso_gene_8272

  • left end position:
    • 4586
  • transcription direction:
    • POSITIVE
  • right end position:
    • 7394
  • centisome position:
    • 44.12161
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13177&oldid=15273"