Difference between revisions of "D-SEDOHEPTULOSE-7-P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-KINASE-RXN PROTEIN-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** serine_th...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-KINASE-RXN PROTEIN-KINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** serine_threonine-protein_kinase
+
** ribonucleoside-diphosphate_reductase
−
** serine_threonine_protein_kinase
+
−
** cyclin-dependent_kinase
+
−
** cyclin-dependent_kinase_2
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.11.21 EC-2.7.11.21]
+
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
−
** [http://enzyme.expasy.org/EC/2.7.11.22 EC-2.7.11.22]
+
−
** [http://enzyme.expasy.org/EC/2.7.11.13 EC-2.7.11.13]
+
−
** [http://enzyme.expasy.org/EC/2.7.11.1 EC-2.7.11.1]
+
−
** [http://enzyme.expasy.org/EC/2.7.11.17 EC-2.7.11.17]
+
−
** [http://enzyme.expasy.org/EC/2.7.11.12 EC-2.7.11.12]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Protein-L-serine-or-L-threonine]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Protein-Ser-or-Thr-phosphate]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[UDP]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[DUDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [protein]-(L-serine/L-threonine)[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 a [protein] (L-serine/L-threonine) phosphate[c] '''+''' 1 ADP[c]
+
** 1 UDP[c] '''+''' 1 a reduced thioredoxin[c] '''=>''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c] '''+''' 1 dUDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19455]]
+
* [[Tiso_gene_10617]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_3991]]
+
* [[Tiso_gene_9915]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13244]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5970]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13509]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5164]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_6216]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8616]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_1492]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_16376]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_10356]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13434]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8016]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_11071]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_8480]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_13974]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_18561]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15059]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_4902]]
+
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_8413]]
+
* [[Tiso_gene_9916]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_17047]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_5596]]
+
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***AUTOMATED-NAME-MATCH
+
***EC-NUMBER
−
* [[Tiso_gene_15848]]
+
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_12828]]
+
* [[Tiso_gene_10138]]
−
** IN-SILICO_ANNOTATION
+
** [[pantograph]]-[[athaliana]]
−
***AUTOMATED-NAME-MATCH
+
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_3977]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_3733]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_3326]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_3762]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_775]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_10543]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_12692]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_8492]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9776]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_14508]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9846]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_5765]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_8328]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_7634]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17022]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9582]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_11397]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_18523]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17050]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17530]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_4479]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_20347]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_2253]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9607]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_16678]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_7814]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_5584]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_2393]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_2607]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_12544]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_10315]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_19611]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_4028]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_169]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_18221]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_14941]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_12236]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_10542]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_7843]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_8701]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_6071]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_2262]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_808]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_3818]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17980]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_19151]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_7813]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_6208]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_3992]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_18334]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_8561]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_12827]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_11990]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17940]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_11594]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_6091]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_14030]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_14940]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_12183]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_15483]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9522]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_7049]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_11962]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_13588]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_14982]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_4265]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_1450]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_307]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_15652]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9800]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_7932]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_10355]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17535]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''12''' reactions found over '''17''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[synechocystis]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
Line 247: Line 56:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P23298 P23298]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28026 28026]
−
** [http://www.uniprot.org/uniprot/P05207 P05207]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P06493 P06493]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02018 R02018]
−
** [http://www.uniprot.org/uniprot/P19026 P19026]
+
−
** [http://www.uniprot.org/uniprot/Q03042 Q03042]
+
−
** [http://www.uniprot.org/uniprot/P11440 P11440]
+
−
** [http://www.uniprot.org/uniprot/P33800 P33800]
+
−
** [http://www.uniprot.org/uniprot/P23437 P23437]
+
−
** [http://www.uniprot.org/uniprot/Q9PSU0 Q9PSU0]
+
−
** [http://www.uniprot.org/uniprot/Q15136 Q15136]
+
−
** [http://www.uniprot.org/uniprot/Q9NRL6 Q9NRL6]
+
−
** [http://www.uniprot.org/uniprot/P24923 P24923]
+
−
** [http://www.uniprot.org/uniprot/P31749 P31749]
+
−
** [http://www.uniprot.org/uniprot/P63086 P63086]
+
−
** [http://www.uniprot.org/uniprot/P24941 P24941]
+
−
** [http://www.uniprot.org/uniprot/P31320 P31320]
+
−
** [http://www.uniprot.org/uniprot/P30285 P30285]
+
−
** [http://www.uniprot.org/uniprot/P35567 P35567]
+
−
** [http://www.uniprot.org/uniprot/P43450 P43450]
+
−
** [http://www.uniprot.org/uniprot/Q02750 Q02750]
+
−
** [http://www.uniprot.org/uniprot/P62344 P62344]
+
−
** [http://www.uniprot.org/uniprot/P31751 P31751]
+
−
** [http://www.uniprot.org/uniprot/Q03114 Q03114]
+
−
** [http://www.uniprot.org/uniprot/Q61410 Q61410]
+
−
** [http://www.uniprot.org/uniprot/P36507 P36507]
+
−
** [http://www.uniprot.org/uniprot/Q07832 Q07832]
+
−
** [http://www.uniprot.org/uniprot/Q06309 Q06309]
+
−
** [http://www.uniprot.org/uniprot/P27361 P27361]
+
−
** [http://www.uniprot.org/uniprot/Q39238 Q39238]
+
−
** [http://www.uniprot.org/uniprot/P36897 P36897]
+
−
** [http://www.uniprot.org/uniprot/Q12851 Q12851]
+
−
** [http://www.uniprot.org/uniprot/Q96CA8 Q96CA8]
+
−
** [http://www.uniprot.org/uniprot/P40376 P40376]
+
−
** [http://www.uniprot.org/uniprot/P50750 P50750]
+
−
** [http://www.uniprot.org/uniprot/P51136 P51136]
+
−
** [http://www.uniprot.org/uniprot/Q64702 Q64702]
+
−
** [http://www.uniprot.org/uniprot/Q8INB9 Q8INB9]
+
−
** [http://www.uniprot.org/uniprot/Q27393 Q27393]
+
−
** [http://www.uniprot.org/uniprot/Q9Y243 Q9Y243]
+
−
** [http://www.uniprot.org/uniprot/Q05759 Q05759]
+
−
** [http://www.uniprot.org/uniprot/P81377 P81377]
+
−
** [http://www.uniprot.org/uniprot/Q03043 Q03043]
+
−
** [http://www.uniprot.org/uniprot/P27704 P27704]
+
−
** [http://www.uniprot.org/uniprot/P13287 P13287]
+
−
** [http://www.uniprot.org/uniprot/P24033 P24033]
+
−
** [http://www.uniprot.org/uniprot/Q04543 Q04543]
+
−
** [http://www.uniprot.org/uniprot/Q09013 Q09013]
+
−
** [http://www.uniprot.org/uniprot/P12370 P12370]
+
−
** [http://www.uniprot.org/uniprot/P32023 P32023]
+
−
** [http://www.uniprot.org/uniprot/Q69277 Q69277]
+
−
** [http://www.uniprot.org/uniprot/Q13873 Q13873]
+
−
** [http://www.uniprot.org/uniprot/P00514 P00514]
+
−
** [http://www.uniprot.org/uniprot/Q60545 Q60545]
+
−
** [http://www.uniprot.org/uniprot/P49615 P49615]
+
−
** [http://www.uniprot.org/uniprot/P51958 P51958]
+
−
** [http://www.uniprot.org/uniprot/Q64595 Q64595]
+
−
** [http://www.uniprot.org/uniprot/Q05999 Q05999]
+
−
** [http://www.uniprot.org/uniprot/Q8VIJ2 Q8VIJ2]
+
−
** [http://www.uniprot.org/uniprot/P47196 P47196]
+
−
** [http://www.uniprot.org/uniprot/P47197 P47197]
+
−
** [http://www.uniprot.org/uniprot/P54739 P54739]
+
−
** [http://www.uniprot.org/uniprot/P54740 P54740]
+
−
** [http://www.uniprot.org/uniprot/Q63484 Q63484]
+
−
** [http://www.uniprot.org/uniprot/Q12706 Q12706]
+
−
** [http://www.uniprot.org/uniprot/P39134 P39134]
+
−
** [http://www.uniprot.org/uniprot/Q24458 Q24458]
+
−
** [http://www.uniprot.org/uniprot/P43063 P43063]
+
−
** [http://www.uniprot.org/uniprot/O09433 O09433]
+
−
** [http://www.uniprot.org/uniprot/O09434 O09434]
+
−
** [http://www.uniprot.org/uniprot/O10416 O10416]
+
−
** [http://www.uniprot.org/uniprot/P97313 P97313]
+
−
** [http://www.uniprot.org/uniprot/Q6P5Z2 Q6P5Z2]
+
−
** [http://www.uniprot.org/uniprot/Q9Z1J2 Q9Z1J2]
+
−
** [http://www.uniprot.org/uniprot/P35426 P35426]
+
−
** [http://www.uniprot.org/uniprot/Q39183 Q39183]
+
−
** [http://www.uniprot.org/uniprot/Q04770 Q04770]
+
−
** [http://www.uniprot.org/uniprot/P34099 P34099]
+
−
** [http://www.uniprot.org/uniprot/P28482 P28482]
+
−
** [http://www.uniprot.org/uniprot/Q41639 Q41639]
+
−
** [http://www.uniprot.org/uniprot/Q88522 Q88522]
+
−
** [http://www.uniprot.org/uniprot/Q24294 Q24294]
+
−
** [http://www.uniprot.org/uniprot/P00513 P00513]
+
−
** [http://www.uniprot.org/uniprot/P00517 P00517]
+
−
** [http://www.uniprot.org/uniprot/P00515 P00515]
+
−
** [http://www.uniprot.org/uniprot/P05131 P05131]
+
−
** [http://www.uniprot.org/uniprot/P24256 P24256]
+
−
** [http://www.uniprot.org/uniprot/P00516 P00516]
+
−
** [http://www.uniprot.org/uniprot/P31322 P31322]
+
−
** [http://www.uniprot.org/uniprot/P06244 P06244]
+
−
** [http://www.uniprot.org/uniprot/P06245 P06245]
+
−
** [http://www.uniprot.org/uniprot/P05986 P05986]
+
−
** [http://www.uniprot.org/uniprot/P07278 P07278]
+
−
** [http://www.uniprot.org/uniprot/P05987 P05987]
+
−
** [http://www.uniprot.org/uniprot/P16905 P16905]
+
−
** [http://www.uniprot.org/uniprot/P31319 P31319]
+
−
** [http://www.uniprot.org/uniprot/P21901 P21901]
+
−
** [http://www.uniprot.org/uniprot/P10644 P10644]
+
−
** [http://www.uniprot.org/uniprot/P17612 P17612]
+
−
** [http://www.uniprot.org/uniprot/P13861 P13861]
+
−
** [http://www.uniprot.org/uniprot/P22694 P22694]
+
−
** [http://www.uniprot.org/uniprot/P22612 P22612]
+
−
** [http://www.uniprot.org/uniprot/P31323 P31323]
+
−
** [http://www.uniprot.org/uniprot/P25321 P25321]
+
−
** [http://www.uniprot.org/uniprot/P68180 P68180]
+
−
** [http://www.uniprot.org/uniprot/P30625 P30625]
+
−
** [http://www.uniprot.org/uniprot/P21137 P21137]
+
−
** [http://www.uniprot.org/uniprot/P12367 P12367]
+
−
** [http://www.uniprot.org/uniprot/P05132 P05132]
+
−
** [http://www.uniprot.org/uniprot/P68181 P68181]
+
−
** [http://www.uniprot.org/uniprot/P12849 P12849]
+
−
** [http://www.uniprot.org/uniprot/P07802 P07802]
+
−
** [http://www.uniprot.org/uniprot/P09456 P09456]
+
−
** [http://www.uniprot.org/uniprot/P27791 P27791]
+
−
** [http://www.uniprot.org/uniprot/P12368 P12368]
+
−
** [http://www.uniprot.org/uniprot/P68182 P68182]
+
−
** [http://www.uniprot.org/uniprot/P12369 P12369]
+
−
** [http://www.uniprot.org/uniprot/Q960L7 Q960L7]
+
−
** [http://www.uniprot.org/uniprot/P31324 P31324]
+
−
** [http://www.uniprot.org/uniprot/P34100 P34100]
+
−
** [http://www.uniprot.org/uniprot/O08815 O08815]
+
−
** [http://www.uniprot.org/uniprot/P05383 P05383]
+
−
** [http://www.uniprot.org/uniprot/P36887 P36887]
+
−
** [http://www.uniprot.org/uniprot/P21136 P21136]
+
−
** [http://www.uniprot.org/uniprot/P14619 P14619]
+
−
** [http://www.uniprot.org/uniprot/P13863 P13863]
+
−
** [http://www.uniprot.org/uniprot/Q7M3M4 Q7M3M4]
+
−
** [http://www.uniprot.org/uniprot/P29620 P29620]
+
−
** [http://www.uniprot.org/uniprot/Q16958 Q16958]
+
−
** [http://www.uniprot.org/uniprot/P38973 P38973]
+
−
** [http://www.uniprot.org/uniprot/Q9T2K8 Q9T2K8]
+
−
** [http://www.uniprot.org/uniprot/P29618 P29618]
+
−
** [http://www.uniprot.org/uniprot/P29619 P29619]
+
−
** [http://www.uniprot.org/uniprot/P24100 P24100]
+
−
** [http://www.uniprot.org/uniprot/P25859 P25859]
+
−
** [http://www.uniprot.org/uniprot/Q00526 Q00526]
+
−
** [http://www.uniprot.org/uniprot/Q00532 Q00532]
+
−
** [http://www.uniprot.org/uniprot/Q00537 Q00537]
+
−
** [http://www.uniprot.org/uniprot/Q00536 Q00536]
+
−
** [http://www.uniprot.org/uniprot/Q00534 Q00534]
+
−
** [http://www.uniprot.org/uniprot/P34112 P34112]
+
−
** [http://www.uniprot.org/uniprot/P39951 P39951]
+
−
** [http://www.uniprot.org/uniprot/P26794 P26794]
+
−
** [http://www.uniprot.org/uniprot/P16892 P16892]
+
−
** [http://www.uniprot.org/uniprot/Q05006 Q05006]
+
−
** [http://www.uniprot.org/uniprot/P31750 P31750]
+
−
** [http://www.uniprot.org/uniprot/P18431 P18431]
+
−
** [http://www.uniprot.org/uniprot/P54119 P54119]
+
−
** [http://www.uniprot.org/uniprot/P54665 P54665]
+
−
** [http://www.uniprot.org/uniprot/P54666 P54666]
+
−
** [http://www.uniprot.org/uniprot/P34117 P34117]
+
−
** [http://www.uniprot.org/uniprot/P34556 P34556]
+
−
** [http://www.uniprot.org/uniprot/Q12741 Q12741]
+
−
** [http://www.uniprot.org/uniprot/Q43361 Q43361]
+
−
** [http://www.uniprot.org/uniprot/P54664 P54664]
+
−
** [http://www.uniprot.org/uniprot/Q07785 Q07785]
+
−
** [http://www.uniprot.org/uniprot/Q25826 Q25826]
+
−
** [http://www.uniprot.org/uniprot/Q41031 Q41031]
+
−
** [http://www.uniprot.org/uniprot/P48609 P48609]
+
−
** [http://www.uniprot.org/uniprot/P11802 P11802]
+
−
** [http://www.uniprot.org/uniprot/Q27168 Q27168]
+
−
** [http://www.uniprot.org/uniprot/P50530 P50530]
+
−
** [http://www.uniprot.org/uniprot/P08018 P08018]
+
−
** [http://www.uniprot.org/uniprot/Q91727 Q91727]
+
−
** [http://www.uniprot.org/uniprot/Q26217 Q26217]
+
−
** [http://www.uniprot.org/uniprot/Q15278 Q15278]
+
−
** [http://www.uniprot.org/uniprot/Q01314 Q01314]
+
−
** [http://www.uniprot.org/uniprot/P49673 P49673]
+
−
** [http://www.uniprot.org/uniprot/Q13237 Q13237]
+
−
** [http://www.uniprot.org/uniprot/O22411 O22411]
+
−
** [http://www.uniprot.org/uniprot/O22412 O22412]
+
−
** [http://www.uniprot.org/uniprot/Q40483 Q40483]
+
−
** [http://www.uniprot.org/uniprot/O49120 O49120]
+
−
** [http://www.uniprot.org/uniprot/P38937 P38937]
+
−
** [http://www.uniprot.org/uniprot/O54874 O54874]
+
−
** [http://www.uniprot.org/uniprot/Q9XTB6 Q9XTB6]
+
−
** [http://www.uniprot.org/uniprot/Q9XTG7 Q9XTG7]
+
−
** [http://www.uniprot.org/uniprot/P41720 P41720]
+
−
** [http://www.uniprot.org/uniprot/O39305 O39305]
+
−
** [http://www.uniprot.org/uniprot/Q17941 Q17941]
+
−
** [http://www.uniprot.org/uniprot/P04413 P04413]
+
−
** [http://www.uniprot.org/uniprot/P09251 P09251]
+
−
** [http://www.uniprot.org/uniprot/P28926 P28926]
+
−
** [http://www.uniprot.org/uniprot/P32516 P32516]
+
−
** [http://www.uniprot.org/uniprot/P17613 P17613]
+
−
** [http://www.uniprot.org/uniprot/P00546 P00546]
+
−
** [http://www.uniprot.org/uniprot/P10741 P10741]
+
−
** [http://www.uniprot.org/uniprot/P10533 P10533]
+
−
** [http://www.uniprot.org/uniprot/P00531 P00531]
+
−
** [http://www.uniprot.org/uniprot/P27966 P27966]
+
−
** [http://www.uniprot.org/uniprot/P04049 P04049]
+
−
** [http://www.uniprot.org/uniprot/P00540 P00540]
+
−
** [http://www.uniprot.org/uniprot/P11309 P11309]
+
−
** [http://www.uniprot.org/uniprot/P10650 P10650]
+
−
** [http://www.uniprot.org/uniprot/P00536 P00536]
+
−
** [http://www.uniprot.org/uniprot/P06803 P06803]
+
−
** [http://www.uniprot.org/uniprot/P00537 P00537]
+
−
** [http://www.uniprot.org/uniprot/P00532 P00532]
+
−
** [http://www.uniprot.org/uniprot/P07331 P07331]
+
−
** [http://www.uniprot.org/uniprot/P00538 P00538]
+
−
** [http://www.uniprot.org/uniprot/P10421 P10421]
+
−
** [http://www.uniprot.org/uniprot/P32593 P32593]
+
−
** [http://www.uniprot.org/uniprot/P18265 P18265]
+
−
** [http://www.uniprot.org/uniprot/P00539 P00539]
+
−
** [http://www.uniprot.org/uniprot/P20505 P20505]
+
−
** [http://www.uniprot.org/uniprot/P16913 P16913]
+
−
** [http://www.uniprot.org/uniprot/P12965 P12965]
+
−
** [http://www.uniprot.org/uniprot/P04551 P04551]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=serine_threonine-protein_kinase}}
+
{{#set: common name=ribonucleoside-diphosphate_reductase}}
−
{{#set: common name=serine_threonine_protein_kinase}}
+
{{#set: ec number=EC-1.17.4.1}}
−
{{#set: common name=cyclin-dependent_kinase}}
+
{{#set: gene associated=Tiso_gene_10617|Tiso_gene_9915|Tiso_gene_9916|Tiso_gene_10138}}
−
{{#set: common name=cyclin-dependent_kinase_2}}
+
{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
−
{{#set: ec number=EC-2.7.11.21}}
+
−
{{#set: ec number=EC-2.7.11.22}}
+
−
{{#set: ec number=EC-2.7.11.13}}
+
−
{{#set: ec number=EC-2.7.11.1}}
+
−
{{#set: ec number=EC-2.7.11.17}}
+
−
{{#set: ec number=EC-2.7.11.12}}
+
−
{{#set: gene associated=Tiso_gene_19455|Tiso_gene_3991|Tiso_gene_13244|Tiso_gene_5970|Tiso_gene_13509|Tiso_gene_5164|Tiso_gene_6216|Tiso_gene_8616|Tiso_gene_1492|Tiso_gene_16376|Tiso_gene_10356|Tiso_gene_13434|Tiso_gene_8016|Tiso_gene_11071|Tiso_gene_8480|Tiso_gene_13974|Tiso_gene_18561|Tiso_gene_15059|Tiso_gene_4902|Tiso_gene_8413|Tiso_gene_17047|Tiso_gene_5596|Tiso_gene_15848|Tiso_gene_12828|Tiso_gene_3977|Tiso_gene_3733|Tiso_gene_3326|Tiso_gene_3762|Tiso_gene_775|Tiso_gene_10543|Tiso_gene_12692|Tiso_gene_8492|Tiso_gene_9776|Tiso_gene_14508|Tiso_gene_9846|Tiso_gene_5765|Tiso_gene_8328|Tiso_gene_7634|Tiso_gene_17022|Tiso_gene_9582|Tiso_gene_11397|Tiso_gene_18523|Tiso_gene_17050|Tiso_gene_17530|Tiso_gene_4479|Tiso_gene_20347|Tiso_gene_2253|Tiso_gene_9607|Tiso_gene_16678|Tiso_gene_7814|Tiso_gene_5584|Tiso_gene_2393|Tiso_gene_2607|Tiso_gene_12544|Tiso_gene_10315|Tiso_gene_19611|Tiso_gene_4028|Tiso_gene_169|Tiso_gene_18221|Tiso_gene_14941|Tiso_gene_12236|Tiso_gene_10542|Tiso_gene_7843|Tiso_gene_8701|Tiso_gene_6071|Tiso_gene_2262|Tiso_gene_808|Tiso_gene_3818|Tiso_gene_17980|Tiso_gene_19151|Tiso_gene_7813|Tiso_gene_6208|Tiso_gene_3992|Tiso_gene_18334|Tiso_gene_8561|Tiso_gene_12827|Tiso_gene_11990|Tiso_gene_17940|Tiso_gene_11594|Tiso_gene_6091|Tiso_gene_14030|Tiso_gene_14940|Tiso_gene_12183|Tiso_gene_15483|Tiso_gene_9522|Tiso_gene_7049|Tiso_gene_11962|Tiso_gene_13588|Tiso_gene_14982|Tiso_gene_4265|Tiso_gene_1450|Tiso_gene_307|Tiso_gene_15652|Tiso_gene_9800|Tiso_gene_7932|Tiso_gene_10355|Tiso_gene_17535}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=synechocystis|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:56, 10 January 2018

Reaction UDPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 a reduced thioredoxin[c] => 1 H2O[c] + 1 an oxidized thioredoxin[c] + 1 dUDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=D-SEDOHEPTULOSE-7-P&oldid=15365"