Difference between revisions of "NITRIC-OXIDE"

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(Created page with "Category:Gene == Gene Tiso_gene_17134 == * left end position: ** 41 * transcription direction: ** NEGATIVE * right end position: ** 3129 * centisome position: ** 1.0526316...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17134 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] ==
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* left end position:
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* direction:
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** 41
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** dihydrolipoyllysine-residue_succinyltransferase_component_of_2-oxoglutarate_dehydrogenase_mitochondrial
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* right end position:
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* ec number:
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** 3129
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** [http://enzyme.expasy.org/EC/1.2.4.2 EC-1.2.4.2]
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* centisome position:
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** 1.0526316   
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* Synonym(s):
 
* Synonym(s):
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** Oxoglutarate decarboxylase
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** 2-oxoglutarate decarboxylation
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ORNITHINE-CYCLODEAMINASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[PROTON]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 H+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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== Pathways associated ==
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* [[ORN-AMINOPENTANOATE-CAT-PWY]]
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== Genes associated with this reaction  ==
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* [[ARG-GLU-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10209]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=41}}
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* UNIPROT:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P23129 P23129]
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{{#set: right end position=3129}}
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** [http://www.uniprot.org/uniprot/Q02218 Q02218]
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{{#set: centisome position=1.0526316    }}
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** [http://www.uniprot.org/uniprot/Q60597 Q60597]
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{{#set: reaction associated=ORNITHINE-CYCLODEAMINASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JRJ8 Q9JRJ8]
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{{#set: pathway associated=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
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** [http://www.uniprot.org/uniprot/P20967 P20967]
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** [http://www.uniprot.org/uniprot/P0AFG3 P0AFG3]
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** [http://www.uniprot.org/uniprot/P20707 P20707]
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** [http://www.uniprot.org/uniprot/P51056 P51056]
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** [http://www.uniprot.org/uniprot/Q56600 Q56600]
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** [http://www.uniprot.org/uniprot/O49541 O49541]
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** [http://www.uniprot.org/uniprot/Q59106 Q59106]
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** [http://www.uniprot.org/uniprot/Q9M2T8 Q9M2T8]
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** [http://www.uniprot.org/uniprot/Q9ZRQ2 Q9ZRQ2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dihydrolipoyllysine-residue_succinyltransferase_component_of_2-oxoglutarate_dehydrogenase_mitochondrial}}
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{{#set: ec number=EC-1.2.4.2}}
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{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
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{{#set: gene associated=Tiso_gene_10209}}
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{{#set: in pathway=PWY-5084|PWY66-398}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:57, 10 January 2018

Reaction 2OXOGLUTDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dihydrolipoyllysine-residue_succinyltransferase_component_of_2-oxoglutarate_dehydrogenase_mitochondrial
  • ec number:
  • Synonym(s):
    • Oxoglutarate decarboxylase
    • 2-oxoglutarate decarboxylation

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_10209
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-5084, 2-oxoglutarate decarboxylation to succinyl-CoA: PWY-5084
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-398, TCA cycle III (animals): PWY66-398
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=NITRIC-OXIDE&oldid=15410"