Difference between revisions of "Tiso gene 16584"

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(Created page with "Category:Gene == Gene Tiso_gene_15145 == * left end position: ** 622 * transcription direction: ** POSITIVE * right end position: ** 4970 * centisome position: ** 11.94545...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12199 RXN-12199] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_15145 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12199 RXN-12199] ==
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* left end position:
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* direction:
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** 622
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 4970
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** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
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* centisome position:
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** 11.945457   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 2 [[WATER]][c] '''+''' 1 [[UTP]][c] '''=>''' 2 [[Pi]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[UMP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 2 H2O[c] '''+''' 1 UTP[c] '''=>''' 2 phosphate[c] '''+''' 2 H+[c] '''+''' 1 UMP[c]
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* [[PWY-6142]]
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* [[PWY-6146]]
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== Genes associated with this reaction  ==
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* [[P42-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5750]]
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* [[Tiso_gene_12899]]
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* [[PWY66-399]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_20236]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7177]], UTP and CTP dephosphorylation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7177 PWY-7177]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=622}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: right end position=4970}}
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{{#set: ec number=EC-3.6.1.5}}
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{{#set: centisome position=11.945457    }}
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{{#set: gene associated=Tiso_gene_12899|Tiso_gene_20236}}
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{{#set: reaction associated=PYRUVATE-CARBOXYLASE-RXN}}
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{{#set: in pathway=PWY-7185|PWY-7177}}
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{{#set: pathway associated=PWY-6142|PWY-6146|P42-PWY|PWY-5750|PWY66-399}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 16:58, 10 January 2018

Reaction RXN-12199

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H2O[c] + 1 UTP[c] => 2 phosphate[c] + 2 H+[c] + 1 UMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7177, UTP and CTP dephosphorylation II: PWY-7177
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_16584&oldid=15492"