Difference between revisions of "Mercapturates"

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(Created page with "Category:Gene == Gene Tiso_gene_14704 == * Synonym(s): == Reactions associated == * 2.7.7.13-RXN ** pantograph-synechocystis * DTDPGLUCOSEPP-RXN ** pant...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14704 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 +
** related_to_isoamyl_alcohol_oxidase
 +
** d-lactate_dehydrogenase
 +
** xylitol_oxidase
 +
** mitochondrial_l-galactono-_-lactone_dehydrogenase
 +
** oxidoreductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
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* [[2.7.7.13-RXN]]
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* With identifiers:
−
** [[pantograph]]-[[synechocystis]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''=>''' 1 [[UDP-N-ACETYLMURAMATE]][c] '''+''' 1 [[NADP]][c]
−
* [[DTDPGLUCOSEPP-RXN]]
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* With common name(s):
−
** [[pantograph]]-[[synechocystis]]
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''=>''' 1 UDP-N-acetyl-α-D-muramate[c] '''+''' 1 NADP+[c]
−
* [[GAMPG]]
+
 
−
** [[pantograph]]-[[creinhardtii]]
+
== Genes associated with this reaction  ==
−
* [[MANNPGUANYLTRANGDP-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_5195]]
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* [[PHOSMANMUT-RXN]]
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** IN-SILICO_ANNOTATION
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** [[pantograph]]-[[synechocystis]]
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***EC-NUMBER
−
== Pathways associated ==
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* [[Tiso_gene_5194]]
−
* [[PWY-5659]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-7814]]
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***EC-NUMBER
−
* [[PWY-3221]]
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* [[Tiso_gene_14187]]
−
* [[PWY-7301]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-7456]]
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***EC-NUMBER
−
* [[PWY-6953]]
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* [[Tiso_gene_12058]]
−
* [[PWY-7413]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-6976]]
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***EC-NUMBER
−
* [[PWY-6974]]
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* [[Tiso_gene_2119]]
−
* [[PWY-6973]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-7414]]
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***EC-NUMBER
−
* [[PWY-7657]]
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* [[Tiso_gene_2120]]
−
* [[PWY-7104]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-7688]]
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***EC-NUMBER
−
* [[PWY-7586]]
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* [[Tiso_gene_4659]]
−
* [[PWY-7315]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-7316]]
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***EC-NUMBER
−
* [[PWY-7312]]
+
* [[Tiso_gene_6635]]
−
* [[PWY-882]]
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** IN-SILICO_ANNOTATION
−
* [[PWY-7318]]
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***EC-NUMBER
−
* [[PWY-6942]]
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* [[Tiso_gene_6787]]
−
* [[PWY-7440]]
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** IN-SILICO_ANNOTATION
−
* [[DTDPRHAMSYN-PWY]]
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***EC-NUMBER
−
* [[PWY-6808]]
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* [[Tiso_gene_14132]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8778]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_210]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_7079]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_18014]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4661]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12685]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7380]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_2121]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=2.7.7.13-RXN|DTDPGLUCOSEPP-RXN|GAMPG|MANNPGUANYLTRANGDP-RXN|PHOSMANMUT-RXN}}
+
* RHEA:
−
{{#set: pathway associated=PWY-5659|PWY-7814|PWY-3221|PWY-7301|PWY-7456|PWY-6953|PWY-7413|PWY-6976|PWY-6974|PWY-6973|PWY-7414|PWY-7657|PWY-7104|PWY-7688|PWY-7586|PWY-7315|PWY-7316|PWY-7312|PWY-882|PWY-7318|PWY-6942|PWY-7440|DTDPRHAMSYN-PWY|PWY-6808}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
 +
* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
 +
** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
 +
** [http://www.uniprot.org/uniprot/P44605 P44605]
 +
** [http://www.uniprot.org/uniprot/P08373 P08373]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=related_to_isoamyl_alcohol_oxidase}}
 +
{{#set: common name=d-lactate_dehydrogenase}}
 +
{{#set: common name=xylitol_oxidase}}
 +
{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
 +
{{#set: common name=oxidoreductase}}
 +
{{#set: ec number=EC-1.3.1.98}}
 +
{{#set: gene associated=Tiso_gene_5195|Tiso_gene_5194|Tiso_gene_14187|Tiso_gene_12058|Tiso_gene_2119|Tiso_gene_2120|Tiso_gene_4659|Tiso_gene_6635|Tiso_gene_6787|Tiso_gene_14132|Tiso_gene_8778|Tiso_gene_210|Tiso_gene_7079|Tiso_gene_18014|Tiso_gene_4661|Tiso_gene_12685|Tiso_gene_7380|Tiso_gene_2121}}
 +
{{#set: in pathway=PWY-6386|PWY-6387}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:59, 10 January 2018

Reaction UDPNACETYLMURAMATEDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • related_to_isoamyl_alcohol_oxidase
    • d-lactate_dehydrogenase
    • xylitol_oxidase
    • mitochondrial_l-galactono-_-lactone_dehydrogenase
    • oxidoreductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): PWY-6386
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): PWY-6387
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links









Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Mercapturates&oldid=15586"