Difference between revisions of "RHODOPSINRT"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Mannosyl9-Nacetylglucosaminyl2 Mannosyl9-Nacetylglucosaminyl2] == * common name: ** a (mannosyl...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14728 RXN-14728] == * direction: ** REVERSIBLE * common name: ** amidase * ec number: ** [http:...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Mannosyl9-Nacetylglucosaminyl2 Mannosyl9-Nacetylglucosaminyl2] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14728 RXN-14728] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** a (mannosyl)9-(N-acetylglucosaminyl)2
+
** amidase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
−
** an {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}
 
−
** {α-D-mannosyl-(1->2)-α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1->3)-[α-D-mannosyl-(1->2)-α-D-mannosyl-(1,6)]-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1->4)-N-acetyl-β-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[3.2.1.113-RXN]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[WATER]][c] '''+''' 1 [[ACETAMIDE]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[AMMONIUM]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 H2O[c] '''+''' 1 acetamide[c] '''<=>''' 1 acetate[c] '''+''' 1 ammonium[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_13682]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a (mannosyl)9-(N-acetylglucosaminyl)2}}
+
* LIGAND-RXN:
−
{{#set: common name=an {&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}|{&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1->3)-[&alpha;-D-mannosyl-(1->2)-&alpha;-D-mannosyl-(1,6)]-&alpha;-D-mannosyl-(1,6)]-&beta;-D-mannosyl-(1->4)-N-acetyl-&beta;-D-glucosaminyl-(1->4)-N-acetyl-D-glucosaminyl}}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00321 R00321]
−
{{#set: consumed by=3.2.1.113-RXN}}
+
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=amidase}}
 +
{{#set: ec number=EC-3.5.1.4}}
 +
{{#set: gene associated=Tiso_gene_13682}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:00, 10 January 2018

Reaction RXN-14728

  • direction:
    • REVERSIBLE
  • common name:
    • amidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 acetamide[c] <=> 1 acetate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RHODOPSINRT&oldid=15685"