Difference between revisions of "RXN0-947"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-947 RXN0-947] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase * ec n...")
 
(Created page with "Category:Gene == Gene Tiso_gene_15128 == * left end position: ** 14 * transcription direction: ** POSITIVE * right end position: ** 1853 * centisome position: ** 0.2683020...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-947 RXN0-947] ==
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== Gene Tiso_gene_15128 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 14
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* common name:
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* transcription direction:
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** lipoate-protein_ligase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.181 EC-2.3.1.181]
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** 1853
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* centisome position:
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** 0.26830205   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[R524-RXN]]
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** 1 [[Lipoyl-Protein-L-Lysine]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Octanoylated-domains]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 a [lipoyl-carrier protein]-L-lysine[c] '''+''' 1 an octanoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c] '''+''' 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c]
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** experimental_annotation
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***automated-name-match
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12893]]
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* [[Tiso_gene_4493]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_4494]]
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***automated-name-match
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[CYANCAT-PWY]]
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== Pathways ==
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* [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=14}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07766 R07766]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1853}}
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{{#set: common name=lipoate-protein_ligase}}
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{{#set: centisome position=0.26830205    }}
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{{#set: ec number=EC-2.3.1.181}}
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{{#set: reaction associated=R524-RXN|RXN-12893}}
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{{#set: gene associated=Tiso_gene_4493|Tiso_gene_4494}}
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{{#set: pathway associated=CYANCAT-PWY}}
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{{#set: in pathway=PWY0-501}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:00, 10 January 2018

Gene Tiso_gene_15128

  • left end position:
    • 14
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1853
  • centisome position:
    • 0.26830205
  • Synonym(s):

Reactions associated

  • R524-RXN
    • in-silico_annotation
      • automated-name-match
    • experimental_annotation
      • automated-name-match
    • pantograph-athaliana
  • RXN-12893
    • in-silico_annotation
      • automated-name-match
    • experimental_annotation
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-947&oldid=15702"