Difference between revisions of "RXN-14264"

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(Created page with "Category:Gene == Gene Tiso_gene_7915 == * left end position: ** 6318 * transcription direction: ** NEGATIVE * right end position: ** 10661 * centisome position: ** 59.0743...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long_c...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_7915 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] ==
* left end position:
+
* direction:
** 6318
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
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** polyketide_synthase
* right end position:
+
** long_chain_acyl-_synthetase
** 10661
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** acyl-_synthetase
* centisome position:
+
** ORF
** 59.074337   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[RXN-12086]]
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* With identifiers:
** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[LINOLEIC_ACID]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-18]][c]
***ec-number
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* With common name(s):
* [[RXN-12579]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 linoleate[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 linoleoyl-CoA[c]
** in-silico_annotation
+
 
***ec-number
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== Genes associated with this reaction  ==
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* [[Tiso_gene_13394]]
***ec-number
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** IN-SILICO_ANNOTATION
== Pathways associated ==
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***EC-NUMBER
* [[LIPAS-PWY]]
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* [[Tiso_gene_348]]
* [[PWY-6857]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_500]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_136]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_9394]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_135]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4191]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10876]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_7855]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-6000]], γ-linolenate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=6318}}
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* RHEA:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33652 33652]
{{#set: right end position=10661}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=59.074337    }}
+
{{#set: common name=polyketide_synthase}}
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
+
{{#set: common name=long_chain_acyl-_synthetase}}
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
+
{{#set: common name=acyl-_synthetase}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_348|Tiso_gene_500|Tiso_gene_136|Tiso_gene_9394|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_7855}}
 +
{{#set: in pathway=PWY-6000}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:05, 10 January 2018

Reaction RXN-9673

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 linoleate[c] => 1 diphosphate[c] + 1 AMP[c] + 1 linoleoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6000, γ-linolenate biosynthesis II (animals): PWY-6000
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links