Difference between revisions of "RXN-14264"

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(Created page with "Category:Gene == Gene Tiso_gene_7915 == * left end position: ** 6318 * transcription direction: ** NEGATIVE * right end position: ** 10661 * centisome position: ** 59.0743...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long_c...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_7915 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9673 RXN-9673] ==
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* left end position:
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* direction:
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** 6318
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** polyketide_synthase
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* right end position:
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** long_chain_acyl-_synthetase
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** 10661
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** acyl-_synthetase
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* centisome position:
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** ORF
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** 59.074337   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12086]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[LINOLEIC_ACID]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-18]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12579]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 linoleate[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 linoleoyl-CoA[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_13394]]
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***ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[LIPAS-PWY]]
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* [[Tiso_gene_348]]
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* [[PWY-6857]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-6000]], γ-linolenate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6000 PWY-6000]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6318}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33652 33652]
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{{#set: right end position=10661}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=59.074337    }}
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{{#set: common name=polyketide_synthase}}
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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{{#set: common name=long_chain_acyl-_synthetase}}
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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{{#set: common name=acyl-_synthetase}}
 +
{{#set: common name=ORF}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: gene associated=Tiso_gene_13394|Tiso_gene_348|Tiso_gene_500|Tiso_gene_136|Tiso_gene_9394|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_10876|Tiso_gene_7855}}
 +
{{#set: in pathway=PWY-6000}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:05, 10 January 2018

Reaction RXN-9673

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • acyl-_synthetase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 linoleate[c] => 1 diphosphate[c] + 1 AMP[c] + 1 linoleoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6000, γ-linolenate biosynthesis II (animals): PWY-6000
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links








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