Difference between revisions of "RXN-17852"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16393 RXN-16393] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** long...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIVINYLCHLOROPHYLLIDE-A DIVINYLCHLOROPHYLLIDE-A] == * smiles: ** C=CC2(C(C)=C4(C=C9(C(C)C(CCC(=...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16393 RXN-16393] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIVINYLCHLOROPHYLLIDE-A DIVINYLCHLOROPHYLLIDE-A] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=CC2(C(C)=C4(C=C9(C(C)C(CCC(=O)[O-])C5(=N([Mg]36(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C7(C(C)=C8(C(=O)[C-](C(OC)=O)C5=C(N67)8)))))9))))
 
* common name:
 
* common name:
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** polyketide_synthase
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** 3,8-divinyl chlorophyllide a
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** long_chain_acyl-_synthetase
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* molecular weight:
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** acyl-_synthetase
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** 610.951   
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-5286]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[DODECANOATE]][c] '''=>''' 1 [[LAUROYLCOA-CPD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-5285]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 laurate[c] '''=>''' 1 lauroyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=polyketide_synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=56927710 56927710]
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{{#set: common name=long_chain_acyl-_synthetase}}
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* CHEMSPIDER:
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{{#set: common name=acyl-_synthetase}}
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** [http://www.chemspider.com/Chemical-Structure.391650.html 391650]
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{{#set: common name=ORF}}
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* CHEBI:
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{{#set: ec number=EC-6.2.1.3}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=38259 38259]
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{{#set: gene associated=Tiso_gene_348|Tiso_gene_135|Tiso_gene_4191|Tiso_gene_136|Tiso_gene_500|Tiso_gene_10876|Tiso_gene_7855|Tiso_gene_13394|Tiso_gene_9394}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-5971}}
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** [http://www.genome.jp/dbget-bin/www_bget?C11832 C11832]
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C=CC2(C(C)=C4(C=C9(C(C)C(CCC(=O)[O-])C5(=N([Mg]36(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C7(C(C)=C8(C(=O)[C-](C(OC)=O)C5=C(N67)8)))))9))))}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=3,8-divinyl chlorophyllide a}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: molecular weight=610.951    }}
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{{#set: consumed by=RXN-5286}}
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{{#set: produced by=RXN-5285}}

Revision as of 17:05, 10 January 2018

Metabolite DIVINYLCHLOROPHYLLIDE-A

  • smiles:
    • C=CC2(C(C)=C4(C=C9(C(C)C(CCC(=O)[O-])C5(=N([Mg]36(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C7(C(C)=C8(C(=O)[C-](C(OC)=O)C5=C(N67)8)))))9))))
  • common name:
    • 3,8-divinyl chlorophyllide a
  • molecular weight:
    • 610.951
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=CC2(C(C)=C4(C=C9(C(C)C(CCC(=O)[O-])C5(=N([Mg]36(N1(=C(C(C=C)=C(C)C1=CC=2N34)C=C7(C(C)=C8(C(=O)[C-](C(OC)=O)C5=C(N67)8)))))9))))" cannot be used as a page name in this wiki.



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