Difference between revisions of "3-hydroxypimeloyl-ACP-methyl-esters"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
 
(Created page with "Category:Gene == Gene Tiso_gene_6497 == * left end position: ** 5775 * transcription direction: ** POSITIVE * right end position: ** 11188 * centisome position: ** 47.6288...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OXALODECARB-RXN OXALODECARB-RXN] ==
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== Gene Tiso_gene_6497 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5775
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.1.1.3 EC-4.1.1.3]
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* right end position:
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** 11188
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* centisome position:
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** 47.628864   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.2.1.21-RXN]]
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** 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
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** [[pantograph]]-[[esiliculosus]]
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* With common name(s):
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* [[GLUCOSYLCERAMIDASE-RXN]]
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** 1 oxaloacetate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 pyruvate[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-10769]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12896]]
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* [[RXN-10773]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13600]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13602]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-13603]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14179]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-5341]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-8036]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12200]]
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* [[RXN-9674]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation: [http://metacyc.org/META/NEW-IMAGE?object=METHYLGALLATE-DEGRADATION-PWY METHYLGALLATE-DEGRADATION-PWY]
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* [[PWY-3121]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6002]]
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* [[PWY-6339]], syringate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6339 PWY-6339]
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* [[PWY-6788]]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5176]]
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* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway): [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY]
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* [[PWY-7092]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7091]]
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== Reconstruction information  ==
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* [[PWY-7089]]
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* [[orthology]]:
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−
** [[pantograph]]:
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5775}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15641 15641]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=11188}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
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{{#set: centisome position=47.628864    }}
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* UNIPROT:
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{{#set: reaction associated=3.2.1.21-RXN|GLUCOSYLCERAMIDASE-RXN|RXN-10769|RXN-10773|RXN-13600|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
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** [http://www.uniprot.org/uniprot/P13187 P13187]
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{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091|PWY-7089}}
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** [http://www.uniprot.org/uniprot/P13155 P13155]
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** [http://www.uniprot.org/uniprot/P13156 P13156]
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** [http://www.uniprot.org/uniprot/Q58628 Q58628]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.38}}
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{{#set: ec number=EC-4.1.1.3}}
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{{#set: gene associated=Tiso_gene_12896|Tiso_gene_12200}}
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{{#set: in pathway=METHYLGALLATE-DEGRADATION-PWY|PWY-6339|P184-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 17:05, 10 January 2018

Gene Tiso_gene_6497

  • left end position:
    • 5775
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11188
  • centisome position:
    • 47.628864
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-hydroxypimeloyl-ACP-methyl-esters&oldid=16066"