Difference between revisions of "Tiso gene 6998"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-166 CPD-166] == * common name: ** a dolichyl β-D-glucosyl phosphate * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] == * direction:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-166 CPD-166] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a dolichyl β-D-glucosyl phosphate
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** glutarate-semialdehyde_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1.24 EC-1.2.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16593]]
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* With identifiers:
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* [[RXN-5472]]
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** 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[NADH]][c]
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* [[RXN-5471]]
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* With common name(s):
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* [[RXN-5470]]
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** 1 NAD+[c] '''+''' 1 succinate semialdehyde[c] '''+''' 1 H2O[c] '''=>''' 2 H+[c] '''+''' 1 succinate[c] '''+''' 1 NADH[c]
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== Reaction(s) known to produce the compound ==
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* [[RXN-16593]]
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== Genes associated with this reaction  ==
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* [[2.4.1.117-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_777]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_91]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6952]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6535]], 4-aminobutanoate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6535 PWY-6535]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6473]], 4-aminobutanoate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6473 PWY-6473]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a dolichyl β-D-glucosyl phosphate}}
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* RHEA:
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{{#set: consumed by=RXN-16593|RXN-5472|RXN-5471|RXN-5470}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13217 13217]
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{{#set: produced by=RXN-16593|2.4.1.117-RXN}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P51649 P51649]
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** [http://www.uniprot.org/uniprot/P51650 P51650]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutarate-semialdehyde_dehydrogenase}}
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{{#set: ec number=EC-1.2.1.24}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_91|Tiso_gene_6952}}
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{{#set: in pathway=PWY-4321|PWY-6535|GLUDEG-I-PWY|PWY-6473}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:07, 10 January 2018

Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutarate-semialdehyde_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 succinate semialdehyde[c] + 1 H2O[c] => 2 H+[c] + 1 succinate[c] + 1 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4321, L-glutamate degradation IV: PWY-4321
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6535, 4-aminobutanoate degradation I: PWY-6535
    • 2 reactions found over 2 reactions in the full pathway
  • GLUDEG-I-PWY, GABA shunt: GLUDEG-I-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6473, 4-aminobutanoate degradation IV: PWY-6473
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6998&oldid=16218"