Difference between revisions of "3-INDOLYLGLYCOLALDEHYDE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_18607 == * left end position: ** 2 * transcription direction: ** POSITIVE * right end position: ** 2874 * centisome position: ** 6.86106300...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] == * direction: ** REVERSIBLE * common name: ** bifunctional_c...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_18607 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHORISMATEMUT-RXN CHORISMATEMUT-RXN] ==
−
* left end position:
+
* direction:
−
** 2
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** bifunctional_chorismate_mutase_prephenate_dehydratase
−
* right end position:
+
* ec number:
−
** 2874
+
** [http://enzyme.expasy.org/EC/5.4.99.5 EC-5.4.99.5]
−
* centisome position:
+
−
** 6.86106300e-2
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ALANINE--TRNA-LIGASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c]
−
***ec-number
+
* With common name(s):
−
** experimental_annotation
+
** 1 chorismate[c] '''<=>''' 1 prephenate[c]
−
***ec-number
+
 
−
== Pathways associated ==
+
== Genes associated with this reaction  ==
−
* [[TRNA-CHARGING-PWY]]
+
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_5940]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
== Pathways  ==
 +
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6120]], L-tyrosine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6120 PWY-6120]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3462]], L-phenylalanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3462 PWY-3462]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3461]], L-tyrosine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3461 PWY-3461]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7626]], bacilysin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7626 PWY-7626]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6627]], salinosporamide A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6627 PWY-6627]
 +
** '''1''' reactions found over '''15''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
−
{{#set: right end position=2874}}
+
* LIGAND-RXN:
−
{{#set: centisome position=6.86106300e-2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715]
−
{{#set: reaction associated=ALANINE--TRNA-LIGASE-RXN}}
+
* UNIPROT:
−
{{#set: pathway associated=TRNA-CHARGING-PWY}}
+
** [http://www.uniprot.org/uniprot/P19080 P19080]
 +
** [http://www.uniprot.org/uniprot/P27603 P27603]
 +
** [http://www.uniprot.org/uniprot/P32178 P32178]
 +
** [http://www.uniprot.org/uniprot/P43900 P43900]
 +
** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7]
 +
** [http://www.uniprot.org/uniprot/P21204 P21204]
 +
** [http://www.uniprot.org/uniprot/Q58029 Q58029]
 +
** [http://www.uniprot.org/uniprot/Q57696 Q57696]
 +
** [http://www.uniprot.org/uniprot/P43902 P43902]
 +
** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3]
 +
** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8]
 +
** [http://www.uniprot.org/uniprot/P07023 P07023]
 +
** [http://www.uniprot.org/uniprot/Q02286 Q02286]
 +
** [http://www.uniprot.org/uniprot/Q02287 Q02287]
 +
** [http://www.uniprot.org/uniprot/P42738 P42738]
 +
** [http://www.uniprot.org/uniprot/O22409 O22409]
 +
** [http://www.uniprot.org/uniprot/O22410 O22410]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=bifunctional_chorismate_mutase_prephenate_dehydratase}}
 +
{{#set: ec number=EC-5.4.99.5}}
 +
{{#set: gene associated=Tiso_gene_5940}}
 +
{{#set: in pathway=PHESYN|PWY-6120|PWY-3462|PWY-3461|PWY-7626|TYRSYN|PWY-6627}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:07, 10 January 2018

Reaction CHORISMATEMUT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • bifunctional_chorismate_mutase_prephenate_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 chorismate[c] <=> 1 prephenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PHESYN, L-phenylalanine biosynthesis I: PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6120, L-tyrosine biosynthesis III: PWY-6120
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3462, L-phenylalanine biosynthesis II: PWY-3462
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3461, L-tyrosine biosynthesis II: PWY-3461
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7626, bacilysin biosynthesis: PWY-7626
    • 1 reactions found over 10 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6627, salinosporamide A biosynthesis: PWY-6627
    • 1 reactions found over 15 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=3-INDOLYLGLYCOLALDEHYDE&oldid=16265"