Difference between revisions of "RXN-17607"

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(Created page with "Category:Gene == Gene Tiso_gene_1365 == * left end position: ** 6843 * transcription direction: ** POSITIVE * right end position: ** 8852 * centisome position: ** 28.45795...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYDECANOYL-ACP-DEHYDR-RXN 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN] == * direction: ** LEFT-TO-RIGHT...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_1365 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYDECANOYL-ACP-DEHYDR-RXN 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN] ==
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* left end position:
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* direction:
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** 6843
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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* ec number:
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** 8852
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 28.457954   
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPSYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[OH-ACYL-ACP]][c] '''=>''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''+''' 1 [[WATER]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] '''=>''' 1 a trans-2-enoyl-[acyl-carrier protein][c] '''+''' 1 H2O[c]
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***ec-number
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-7219]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated: [http://metacyc.org/META/NEW-IMAGE?object=FASYN-ELONG-PWY FASYN-ELONG-PWY]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=6843}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10208 R10208]
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{{#set: right end position=8852}}
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* UNIPROT:
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{{#set: centisome position=28.457954    }}
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** [http://www.uniprot.org/uniprot/P0A6Q3 P0A6Q3]
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{{#set: reaction associated=ATPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P45159 P45159]
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{{#set: pathway associated=PWY-7219}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=polyketide_synthase}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_135|Tiso_gene_6884|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_13394}}
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{{#set: in pathway=FASYN-ELONG-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:08, 10 January 2018

Reaction 3-HYDROXYDECANOYL-ACP-DEHYDR-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a (3R)-3-hydroxyacyl-[acyl-carrier protein][c] => 1 a trans-2-enoyl-[acyl-carrier protein][c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17607&oldid=16356"