Difference between revisions of "CPD-11592"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4284 == * left end position: ** 53 * transcription direction: ** NEGATIVE * right end position: ** 2586 * centisome position: ** 0.3513657...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] ==
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== Gene Tiso_gene_4284 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 53
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
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** NEGATIVE
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* right end position:
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** 2586
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* centisome position:
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** 0.3513657   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-12587]]
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** 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[PHE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 L-glutamate[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''<=>''' 1 L-phenylalanine[c] '''+''' 1 2-oxoglutarate[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12588]]
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* [[Tiso_gene_6815]]
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** in-silico_annotation
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** [[pantograph]]-[[athaliana]]
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***ec-number
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** [[pantograph]]-[[synechocystis]]
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** experimental_annotation
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** [[pantograph]]-[[creinhardtii]]
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***ec-number
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17809]]
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* [[RXN-14382]]
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** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
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* [[Tiso_gene_15680]]
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***ec-number
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** [[pantograph]]-[[athaliana]]
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** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-14384]]
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** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14385]]
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** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13892]]
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* [[RXN-14386]]
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** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13538]]
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* [[RXN-15881]]
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** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_10680]]
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* [[RXN-9787]]
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** [[pantograph]]-[[athaliana]]
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** in-silico_annotation
−
** [[pantograph]]-[[synechocystis]]
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***ec-number
 +
** experimental_annotation
 +
***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
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* [[RXN0-308]]
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** [[pantograph]]-[[creinhardtii]]
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** in-silico_annotation
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** [[pantograph]]-[[creinhardtii]]
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***ec-number
−
* [[Tiso_gene_17718]]
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** experimental_annotation
−
** [[pantograph]]-[[athaliana]]
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***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY0-1021]]
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* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
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* [[PWY-6823]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7250]]
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* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
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* [[PWY-6892]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6891]]
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* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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−
* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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−
== Reconstruction information  ==
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−
* [[orthology]]:
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−
** [[pantograph]]:
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−
*** [[creinhardtii]]
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−
*** [[synechocystis]]
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−
*** [[athaliana]]
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−
*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=53}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25152 25152]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2586}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
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{{#set: centisome position=0.3513657    }}
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* UNIPROT:
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{{#set: reaction associated=RXN-12587|RXN-12588|RXN-14382|RXN-14384|RXN-14385|RXN-14386|RXN-15881|RXN-9787|RXN0-308}}
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** [http://www.uniprot.org/uniprot/O84642 O84642]
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{{#set: pathway associated=PWY0-1021|PWY-6823|PWY-7250|PWY-6892|PWY-6891}}
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** [http://www.uniprot.org/uniprot/Q02636 Q02636]
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−
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
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** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
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** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
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** [http://www.uniprot.org/uniprot/O59096 O59096]
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** [http://www.uniprot.org/uniprot/O58489 O58489]
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** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
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** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
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** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
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** [http://www.uniprot.org/uniprot/P95468 P95468]
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** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
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** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
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** [http://www.uniprot.org/uniprot/P74861 P74861]
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** [http://www.uniprot.org/uniprot/P04693 P04693]
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−
{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.57}}
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−
{{#set: gene associated=Tiso_gene_6815|Tiso_gene_17809|Tiso_gene_15680|Tiso_gene_13892|Tiso_gene_13538|Tiso_gene_10680|Tiso_gene_17718}}
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−
{{#set: in pathway=ANAPHENOXI-PWY|PWY-7432|PWY-5079|PHESYN}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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Revision as of 17:08, 10 January 2018

Gene Tiso_gene_4284

  • left end position:
    • 53
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2586
  • centisome position:
    • 0.3513657
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-11592&oldid=16364"