Difference between revisions of "RXN1G-210"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=INORGPYROPHOSPHAT-RXN INORGPYROPHOSPHAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Tra...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** CrtZ == Reaction Formula == *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=INORGPYROPHOSPHAT-RXN INORGPYROPHOSPHAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Transmembrane_protein
 
−
** inorganic_pyrophosphatase
 
−
** ORF
 
−
** h+-translocating_pyrophosphatase
 
−
** Inorganic pyrophosphatase
 
−
** mitochondrial_carrier_protein
 
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/3.6.1.1 EC-3.6.1.1]
 
 
* Synonym(s):
 
* Synonym(s):
 +
** CrtZ
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[PPI]][c] '''=>''' 2 [[Pi]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-7409]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD1F-130]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 diphosphate[c] '''=>''' 2 phosphate[c] '''+''' 1 H+[c]
+
** 1 β-cryptoxanthin[c] '''+''' 1 oxygen[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 zeaxanthin[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16197]]
+
* [[Tiso_gene_10837]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_7014]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_2850]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_17879]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_17889]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_9490]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
−
* [[Tiso_gene_1110]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[synechocystis]]
 
−
* [[Tiso_gene_6277]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_16375]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_2851]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_15874]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_17878]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7805]], aminomethylphosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
+
* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
+
* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[creinhardtii]]
 
 
*** [[synechocystis]]
 
*** [[synechocystis]]
−
*** [[athaliana]]
 
−
*** [[esiliculosus]]
 
−
* [[manual]]:
 
−
** [[primary_network]]
 
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[experimental_annotation]]
 
−
*** [[in-silico_annotation]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24576 24576]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00004 R00004]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P21616 P21616]
+
−
** [http://www.uniprot.org/uniprot/P31414 P31414]
+
−
** [http://www.uniprot.org/uniprot/P28239 P28239]
+
−
** [http://www.uniprot.org/uniprot/P37980 P37980]
+
−
** [http://www.uniprot.org/uniprot/P84491 P84491]
+
−
** [http://www.uniprot.org/uniprot/O59570 O59570]
+
−
** [http://www.uniprot.org/uniprot/Q9S941 Q9S941]
+
−
** [http://www.uniprot.org/uniprot/Q9S939 Q9S939]
+
−
** [http://www.uniprot.org/uniprot/Q9S936 Q9S936]
+
−
** [http://www.uniprot.org/uniprot/O26363 O26363]
+
−
** [http://www.uniprot.org/uniprot/Q9S940 Q9S940]
+
−
** [http://www.uniprot.org/uniprot/Q9S938 Q9S938]
+
−
** [http://www.uniprot.org/uniprot/Q9S937 Q9S937]
+
−
** [http://www.uniprot.org/uniprot/Q9PHM9 Q9PHM9]
+
−
** [http://www.uniprot.org/uniprot/Q9UY24 Q9UY24]
+
−
** [http://www.uniprot.org/uniprot/Q9JVG3 Q9JVG3]
+
−
** [http://www.uniprot.org/uniprot/P47593 P47593]
+
−
** [http://www.uniprot.org/uniprot/Q974Y8 Q974Y8]
+
−
** [http://www.uniprot.org/uniprot/O05724 O05724]
+
−
** [http://www.uniprot.org/uniprot/P19514 P19514]
+
−
** [http://www.uniprot.org/uniprot/P00817 P00817]
+
−
** [http://www.uniprot.org/uniprot/P0A7A9 P0A7A9]
+
−
** [http://www.uniprot.org/uniprot/P13998 P13998]
+
−
** [http://www.uniprot.org/uniprot/P19117 P19117]
+
−
** [http://www.uniprot.org/uniprot/P21216 P21216]
+
−
** [http://www.uniprot.org/uniprot/Q9R5T3 Q9R5T3]
+
−
** [http://www.uniprot.org/uniprot/P37981 P37981]
+
−
** [http://www.uniprot.org/uniprot/Q43801 Q43801]
+
−
** [http://www.uniprot.org/uniprot/Q43798 Q43798]
+
−
** [http://www.uniprot.org/uniprot/Q43797 Q43797]
+
−
** [http://www.uniprot.org/uniprot/P50308 P50308]
+
−
** [http://www.uniprot.org/uniprot/Q43796 Q43796]
+
−
** [http://www.uniprot.org/uniprot/P93409 P93409]
+
−
** [http://www.uniprot.org/uniprot/Q8H616 Q8H616]
+
−
** [http://www.uniprot.org/uniprot/P93410 P93410]
+
−
** [http://www.uniprot.org/uniprot/P75250 P75250]
+
−
** [http://www.uniprot.org/uniprot/Q49071 Q49071]
+
−
** [http://www.uniprot.org/uniprot/O48556 O48556]
+
−
** [http://www.uniprot.org/uniprot/O22537 O22537]
+
−
** [http://www.uniprot.org/uniprot/O82793 O82793]
+
−
** [http://www.uniprot.org/uniprot/O23979 O23979]
+
−
** [http://www.uniprot.org/uniprot/O49949 O49949]
+
−
** [http://www.uniprot.org/uniprot/Q43187 Q43187]
+
−
** [http://www.uniprot.org/uniprot/O22124 O22124]
+
−
** [http://www.uniprot.org/uniprot/Q42650 Q42650]
+
−
** [http://www.uniprot.org/uniprot/Q42651 Q42651]
+
−
** [http://www.uniprot.org/uniprot/O65151 O65151]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Transmembrane_protein}}
+
{{#set: common name=CrtZ}}
−
{{#set: common name=inorganic_pyrophosphatase}}
+
{{#set: gene associated=Tiso_gene_10837}}
−
{{#set: common name=ORF}}
+
{{#set: in pathway=PWY-5288|PWY-5944|PWY-7638}}
−
{{#set: common name=h+-translocating_pyrophosphatase}}
+
−
{{#set: common name=Inorganic pyrophosphatase}}
+
−
{{#set: common name=mitochondrial_carrier_protein}}
+
−
{{#set: ec number=EC-3.6.1.1}}
+
−
{{#set: gene associated=Tiso_gene_16197|Tiso_gene_7014|Tiso_gene_2850|Tiso_gene_17879|Tiso_gene_17889|Tiso_gene_9490|Tiso_gene_1110|Tiso_gene_6277|Tiso_gene_16375|Tiso_gene_2851|Tiso_gene_15874|Tiso_gene_17878}}
+
−
{{#set: in pathway=PWY-7805|PWY-7807}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+
{{#set: reconstruction source=synechocystis}}
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 17:09, 10 January 2018

Reaction RXN-8026

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):
    • CrtZ

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5288, astaxanthin biosynthesis (bacteria, fungi, algae): PWY-5288
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5944, zeaxanthin biosynthesis: PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7638, echinenone and zeaxanthin biosynthesis (Synechocystis): PWY-7638
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1G-210&oldid=16421"