Difference between revisions of "CPD-9646"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLATECYC-RXN ADENYLATECYC-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adenylate_cyc...")
 
(Created page with "Category:Gene == Gene Tiso_gene_12778 == * left end position: ** 62 * transcription direction: ** POSITIVE * right end position: ** 6172 * centisome position: ** 0.9228937...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLATECYC-RXN ADENYLATECYC-RXN] ==
+
== Gene Tiso_gene_12778 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 62
−
* common name:
+
* transcription direction:
−
** adenylate_cyclase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/4.6.1.1 EC-4.6.1.1]
+
** 6172
 +
* centisome position:
 +
** 0.92289376   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[3-ISOPROPYLMALISOM-RXN]]
−
** 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CAMP]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***ec-number
−
** 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 cyclic-AMP[c]
+
** experimental_annotation
−
 
+
***ec-number
−
== Genes associated with this reaction  ==
+
** [[pantograph]]-[[athaliana]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_13108]]
+
* [[HOMOACONITATE-HYDRATASE-RXN]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-13163]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
* [[RXN-13722]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[RXN-8991]]
 +
** in-silico_annotation
 +
***ec-number
 +
** experimental_annotation
 +
***ec-number
 +
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_8950]]
+
== Pathways associated ==
−
** [[pantograph]]-[[creinhardtii]]
+
* [[PWY-3081]]
−
* [[Tiso_gene_9251]]
+
* [[LYSINE-AMINOAD-PWY]]
−
** IN-SILICO_ANNOTATION
+
* [[P241-PWY]]
−
***AUTOMATED-NAME-MATCH
+
* [[LEUSYN-PWY]]
−
* [[Tiso_gene_1107]]
+
* [[PWY-6871]]
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16074]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_34]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_16294]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16143]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_17342]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_10744]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16542]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_14301]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_6404]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15744]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_6871]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5483]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_10495]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_9865]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[creinhardtii]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=62}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15389 15389]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=6172}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00089 R00089]
+
{{#set: centisome position=0.92289376    }}
−
* UNIPROT:
+
{{#set: reaction associated=3-ISOPROPYLMALISOM-RXN|HOMOACONITATE-HYDRATASE-RXN|RXN-13163|RXN-13722|RXN-8991}}
−
** [http://www.uniprot.org/uniprot/P14605 P14605]
+
{{#set: pathway associated=PWY-3081|LYSINE-AMINOAD-PWY|P241-PWY|LEUSYN-PWY|PWY-6871}}
−
** [http://www.uniprot.org/uniprot/Q05766 Q05766]
+
−
** [http://www.uniprot.org/uniprot/P21932 P21932]
+
−
** [http://www.uniprot.org/uniprot/P19754 P19754]
+
−
** [http://www.uniprot.org/uniprot/P26769 P26769]
+
−
** [http://www.uniprot.org/uniprot/P26770 P26770]
+
−
** [http://www.uniprot.org/uniprot/Q03343 Q03343]
+
−
** [http://www.uniprot.org/uniprot/Q01341 Q01341]
+
−
** [http://www.uniprot.org/uniprot/P40134 P40134]
+
−
** [http://www.uniprot.org/uniprot/P40146 P40146]
+
−
** [http://www.uniprot.org/uniprot/P51829 P51829]
+
−
** [http://www.uniprot.org/uniprot/P49606 P49606]
+
−
** [http://www.uniprot.org/uniprot/P0A1A7 P0A1A7]
+
−
** [http://www.uniprot.org/uniprot/P19485 P19485]
+
−
** [http://www.uniprot.org/uniprot/Q03100 Q03100]
+
−
** [http://www.uniprot.org/uniprot/P32870 P32870]
+
−
** [http://www.uniprot.org/uniprot/Q08462 Q08462]
+
−
** [http://www.uniprot.org/uniprot/P43524 P43524]
+
−
** [http://www.uniprot.org/uniprot/Q44561 Q44561]
+
−
** [http://www.uniprot.org/uniprot/P51830 P51830]
+
−
** [http://www.uniprot.org/uniprot/Q01513 Q01513]
+
−
** [http://www.uniprot.org/uniprot/P40136 P40136]
+
−
** [http://www.uniprot.org/uniprot/P15318 P15318]
+
−
** [http://www.uniprot.org/uniprot/P08678 P08678]
+
−
** [http://www.uniprot.org/uniprot/P23466 P23466]
+
−
** [http://www.uniprot.org/uniprot/P00936 P00936]
+
−
** [http://www.uniprot.org/uniprot/P27580 P27580]
+
−
** [http://www.uniprot.org/uniprot/P40145 P40145]
+
−
** [http://www.uniprot.org/uniprot/P26338 P26338]
+
−
** [http://www.uniprot.org/uniprot/P40130 P40130]
+
−
** [http://www.uniprot.org/uniprot/P30528 P30528]
+
−
** [http://www.uniprot.org/uniprot/Q9QW33 Q9QW33]
+
−
** [http://www.uniprot.org/uniprot/P72951 P72951]
+
−
** [http://www.uniprot.org/uniprot/P40138 P40138]
+
−
** [http://www.uniprot.org/uniprot/Q9VW60 Q9VW60]
+
−
** [http://www.uniprot.org/uniprot/O96306 O96306]
+
−
** [http://www.uniprot.org/uniprot/Q9Z286 Q9Z286]
+
−
** [http://www.uniprot.org/uniprot/O76229 O76229]
+
−
** [http://www.uniprot.org/uniprot/O77079 O77079]
+
−
** [http://www.uniprot.org/uniprot/O96762 O96762]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=adenylate_cyclase}}
+
−
{{#set: ec number=EC-4.6.1.1}}
+
−
{{#set: gene associated=Tiso_gene_13108|Tiso_gene_8950|Tiso_gene_9251|Tiso_gene_1107|Tiso_gene_16074|Tiso_gene_34|Tiso_gene_16294|Tiso_gene_16143|Tiso_gene_17342|Tiso_gene_10744|Tiso_gene_16542|Tiso_gene_14301|Tiso_gene_6404|Tiso_gene_15744|Tiso_gene_6871|Tiso_gene_5483|Tiso_gene_10495|Tiso_gene_9865}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:09, 10 January 2018

Gene Tiso_gene_12778

  • left end position:
    • 62
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6172
  • centisome position:
    • 0.92289376
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-9646&oldid=16451"