Difference between revisions of "CPD-3617"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-509 RXN1G-509] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis,cis-9,21-C...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == * direction: ** LEFT-TO-RIGHT * common name: ** proline,2-oxoglutarate-...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline) |
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/1. | + | ** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11] |
* Synonym(s): | * Synonym(s): | ||
+ | ** prolyl hydroxylase | ||
+ | ** prolyl 4-hydroxylase | ||
+ | ** proline,2-oxoglutarate 4-dioxygenase | ||
+ | ** proline hydroxylase | ||
+ | ** protocollagen hydroxylase | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[4-HYDROXY-L-PROLINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 oxygen[c] '''+''' 1 L-proline[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 trans-4-hydroxy-L-proline[c] '''+''' 1 CO2[c] '''+''' 1 succinate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[Tiso_gene_2158]] |
** [[pantograph]]-[[esiliculosus]] | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_17593]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_18145]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_18933]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_6296]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_2280]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_19638]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_18208]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_292]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_9873]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_18235]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_1468]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_15594]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_9035]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_15328]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_16842]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_3021]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_9227]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_16122]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_17919]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_17823]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_18689]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_8652]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_9455]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_9165]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_9636]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | * [[Tiso_gene_13008]] | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[creinhardtii]] | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
== Reconstruction information == | == Reconstruction information == | ||
* [[orthology]]: | * [[orthology]]: | ||
** [[pantograph]]: | ** [[pantograph]]: | ||
+ | *** [[creinhardtii]] | ||
+ | *** [[athaliana]] | ||
*** [[esiliculosus]] | *** [[esiliculosus]] | ||
+ | * [[manual]]: | ||
+ | ** [[primary_network]] | ||
== External links == | == External links == | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)}} |
− | {{#set: ec number=EC-1. | + | {{#set: ec number=EC-1.14.11}} |
− | {{#set: gene associated= | + | {{#set: common name=prolyl hydroxylase|prolyl 4-hydroxylase|proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|protocollagen hydroxylase}} |
− | {{#set: in pathway= | + | {{#set: gene associated=Tiso_gene_2158|Tiso_gene_17593|Tiso_gene_18145|Tiso_gene_18933|Tiso_gene_6296|Tiso_gene_2280|Tiso_gene_19638|Tiso_gene_18208|Tiso_gene_292|Tiso_gene_9873|Tiso_gene_18235|Tiso_gene_1468|Tiso_gene_15594|Tiso_gene_9035|Tiso_gene_15328|Tiso_gene_16842|Tiso_gene_3021|Tiso_gene_9227|Tiso_gene_16122|Tiso_gene_17919|Tiso_gene_17823|Tiso_gene_18689|Tiso_gene_8652|Tiso_gene_9455|Tiso_gene_9165|Tiso_gene_9636|Tiso_gene_13008}} |
+ | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
− | {{#set: reconstruction source=esiliculosus}} | + | {{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}} |
+ | {{#set: reconstruction category=manual}} | ||
+ | {{#set: reconstruction source=primary_network}} |
Revision as of 17:09, 10 January 2018
Contents
Reaction RXN490-3641
- direction:
- LEFT-TO-RIGHT
- common name:
- proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)
- ec number:
- Synonym(s):
- prolyl hydroxylase
- prolyl 4-hydroxylase
- proline,2-oxoglutarate 4-dioxygenase
- proline hydroxylase
- protocollagen hydroxylase
Reaction Formula
- With identifiers:
- 1 OXYGEN-MOLECULE[c] + 1 PRO[c] + 1 2-KETOGLUTARATE[c] => 1 4-HYDROXY-L-PROLINE[c] + 1 CARBON-DIOXIDE[c] + 1 SUC[c]
- With common name(s):
- 1 oxygen[c] + 1 L-proline[c] + 1 2-oxoglutarate[c] => 1 trans-4-hydroxy-L-proline[c] + 1 CO2[c] + 1 succinate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_2158
- Tiso_gene_17593
- Tiso_gene_18145
- Tiso_gene_18933
- Tiso_gene_6296
- Tiso_gene_2280
- Tiso_gene_19638
- Tiso_gene_18208
- Tiso_gene_292
- Tiso_gene_9873
- Tiso_gene_18235
- Tiso_gene_1468
- Tiso_gene_15594
- Tiso_gene_9035
- Tiso_gene_15328
- Tiso_gene_16842
- Tiso_gene_3021
- Tiso_gene_9227
- Tiso_gene_16122
- Tiso_gene_17919
- Tiso_gene_17823
- Tiso_gene_18689
- Tiso_gene_8652
- Tiso_gene_9455
- Tiso_gene_9165
- Tiso_gene_9636
- Tiso_gene_13008
Pathways
Reconstruction information
External links
- LIGAND-RXN: