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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7609 RXN-7609] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Pre-tRNA-3-prime-half-molecules Pre-tRNA-3-prime-half-molecules] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** 5_deoxy_cytosolic_type_c_protein | + | ** a 3'-half-tRNA molecule with a 5'-OH end |
| − | ** 5_-nucleotidase
| + | |
| − | ** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
| + | |
| − | ** ORF
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 [[WATER]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[GUANOSINE]][c] '''+''' 1 [[Pi]][c]
| + | * [[3.1.27.9-RXN]] |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 H2O[c] '''+''' 1 GMP[c] '''=>''' 1 guanosine[c] '''+''' 1 phosphate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_14435]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_6988]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[Tiso_gene_13929]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_14434]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_5911]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_14246]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_9166]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[Tiso_gene_6640]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608] | + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
| + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
| + | |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a 3'-half-tRNA molecule with a 5'-OH end}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27714 27714]
| + | {{#set: produced by=3.1.27.9-RXN}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01227 R01227]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=5_deoxy_cytosolic_type_c_protein}} | + | |
| − | {{#set: common name=5_-nucleotidase}}
| + | |
| − | {{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
| + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: ec number=EC-3.1.3.5}}
| + | |
| − | {{#set: gene associated=Tiso_gene_14435|Tiso_gene_6988|Tiso_gene_13929|Tiso_gene_14434|Tiso_gene_5911|Tiso_gene_14246|Tiso_gene_9166|Tiso_gene_6640}}
| + | |
| − | {{#set: in pathway=PWY-6608|PWY-6607|PWY-6606}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|esiliculosus}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
