Difference between revisions of "Tiso gene 4692"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_ZN+2 ExchangeSeed_ZN+2] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formu...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ExchangeSeed_ZN+2 ExchangeSeed_ZN+2] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** mitochondrial_tyrosyl-trna_synthetase
 +
** methionyl-trna
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ZN+2]][C-BOUNDARY] '''<=>''' 1.0 [[ZN+2]][e]
+
** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TYR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Zn2+[C-BOUNDARY] '''<=>''' 1.0 Zn2+[e]
+
** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAtyr[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_10378]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4175]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4174]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12171]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* [[orthology]]:
−
** [[added to manage seeds from boundary to extracellular compartment]]
+
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
−
{{#set: reconstruction category=manual}}
+
* LIGAND-RXN:
−
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P28669 P28669]
 +
** [http://www.uniprot.org/uniprot/P22326 P22326]
 +
** [http://www.uniprot.org/uniprot/P36421 P36421]
 +
** [http://www.uniprot.org/uniprot/P41256 P41256]
 +
** [http://www.uniprot.org/uniprot/O51343 O51343]
 +
** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
 +
** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
 +
** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
 +
** [http://www.uniprot.org/uniprot/P47693 P47693]
 +
** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
 +
** [http://www.uniprot.org/uniprot/P43836 P43836]
 +
** [http://www.uniprot.org/uniprot/O83806 O83806]
 +
** [http://www.uniprot.org/uniprot/Q57834 Q57834]
 +
** [http://www.uniprot.org/uniprot/P56417 P56417]
 +
** [http://www.uniprot.org/uniprot/O67632 O67632]
 +
** [http://www.uniprot.org/uniprot/O58739 O58739]
 +
** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
 +
** [http://www.uniprot.org/uniprot/O27795 O27795]
 +
** [http://www.uniprot.org/uniprot/O84065 O84065]
 +
** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
 +
** [http://www.uniprot.org/uniprot/P48527 P48527]
 +
** [http://www.uniprot.org/uniprot/Q49900 Q49900]
 +
** [http://www.uniprot.org/uniprot/P75122 P75122]
 +
** [http://www.uniprot.org/uniprot/P73141 P73141]
 +
** [http://www.uniprot.org/uniprot/P73144 P73144]
 +
** [http://www.uniprot.org/uniprot/P95982 P95982]
 +
** [http://www.uniprot.org/uniprot/P00952 P00952]
 +
** [http://www.uniprot.org/uniprot/P04077 P04077]
 +
** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
 +
** [http://www.uniprot.org/uniprot/P12063 P12063]
 +
** [http://www.uniprot.org/uniprot/P93363 P93363]
 +
** [http://www.uniprot.org/uniprot/O14055 O14055]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=mitochondrial_tyrosyl-trna_synthetase}}
 +
{{#set: common name=methionyl-trna}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-6.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_10378|Tiso_gene_4175|Tiso_gene_4174|Tiso_gene_12171}}
 +
{{#set: in pathway=TRNA-CHARGING-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:11, 10 January 2018

Reaction TYROSINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mitochondrial_tyrosyl-trna_synthetase
    • methionyl-trna
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-tyrosine[c] + 1 ATP[c] + 1 a tRNAtyr[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-tyrosyl-[tRNAtyr][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







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