Difference between revisions of "Damaged-DNA-Pyrimidine"

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(Created page with "Category:Gene == Gene Tiso_gene_4823 == * left end position: ** 15823 * transcription direction: ** POSITIVE * right end position: ** 16988 * centisome position: ** 88.808...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] == * direction: ** REVERSIBLE * common name: ** sir2-family_protein_hdac...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4823 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] ==
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* left end position:
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* direction:
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** 15823
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** sir2-family_protein_hdac1
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* right end position:
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** histone_deacetylase
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** 16988
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** ORF
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* centisome position:
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** histone_deacetylase_7a
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** 88.80844   
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** histone_deacetylase_1
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.98 EC-3.5.1.98]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.1.3.66-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[WATER]][c] '''+''' 1 [[Histone-Acetyl-Lysine]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[Histone-L-lysine]][c]
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***ec-number
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* With common name(s):
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* [[RXN-10959]]
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** 1 H2O[c] '''+''' 1 a [histone]-N6-acetyl-L-lysine[c] '''<=>''' 1 acetate[c] '''+''' 1 a [histone]-L-lysine[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[RXN-10960]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_727]]
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***ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PWY-6368]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17340]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17377]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_275]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10459]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_19850]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_18096]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17880]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3315]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12946]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16490]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_12131]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18920]]
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** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=15823}}
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{{#set: direction=REVERSIBLE}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=sir2-family_protein_hdac1}}
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{{#set: right end position=16988}}
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{{#set: common name=histone_deacetylase}}
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{{#set: centisome position=88.80844    }}
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{{#set: common name=ORF}}
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{{#set: reaction associated=3.1.3.66-RXN|RXN-10959|RXN-10960}}
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{{#set: common name=histone_deacetylase_7a}}
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{{#set: pathway associated=PWY-6368}}
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{{#set: common name=histone_deacetylase_1}}
 +
{{#set: ec number=EC-3.5.1.98}}
 +
{{#set: gene associated=Tiso_gene_727|Tiso_gene_17340|Tiso_gene_17377|Tiso_gene_275|Tiso_gene_10459|Tiso_gene_19850|Tiso_gene_18096|Tiso_gene_17880|Tiso_gene_3315|Tiso_gene_12946|Tiso_gene_16490|Tiso_gene_12131|Tiso_gene_18920}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:12, 10 January 2018

Reaction 3.5.1.98-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • sir2-family_protein_hdac1
    • histone_deacetylase
    • ORF
    • histone_deacetylase_7a
    • histone_deacetylase_1
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Damaged-DNA-Pyrimidine&oldid=16633"