Difference between revisions of "Tiso gene 6098"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] == * direction: ** REVERSIBLE * common name: ** sir2-family_protein_hdac...")
 
(Created page with "Category:Gene == Gene Tiso_gene_195 == * left end position: ** 4431 * transcription direction: ** POSITIVE * right end position: ** 5957 * centisome position: ** 11.757058...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] ==
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== Gene Tiso_gene_195 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 4431
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* common name:
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* transcription direction:
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** sir2-family_protein_hdac1
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** POSITIVE
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** histone_deacetylase
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* right end position:
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** ORF
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** 5957
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** histone_deacetylase_7a
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* centisome position:
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** histone_deacetylase_1
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** 11.757058   
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* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.98 EC-3.5.1.98]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Histone-Acetyl-Lysine]][c] '''<=>''' 1 [[Histone-L-lysine]][c] '''+''' 1 [[ACET]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 a [histone]-N6-acetyl-L-lysine[c] '''<=>''' 1 a [histone]-L-lysine[c] '''+''' 1 acetate[c]
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* [[CDPKIN-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[DADPKIN-RXN]]
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* [[Tiso_gene_10459]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***AUTOMATED-NAME-MATCH
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* [[DCDPKIN-RXN]]
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* [[Tiso_gene_17880]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[DGDPKIN-RXN]]
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* [[Tiso_gene_17340]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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* [[Tiso_gene_12946]]
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* [[DTDPKIN-RXN]]
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** [[pantograph]]-[[esiliculosus]]
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** in-silico_annotation
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* [[Tiso_gene_12131]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[DUDPKIN-RXN]]
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***AUTOMATED-NAME-MATCH
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** in-silico_annotation
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* [[Tiso_gene_16490]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[GDPKIN-RXN]]
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***AUTOMATED-NAME-MATCH
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** in-silico_annotation
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* [[Tiso_gene_3315]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[NUCLEOSIDE-DIP-KIN-RXN]]
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***AUTOMATED-NAME-MATCH
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** in-silico_annotation
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* [[Tiso_gene_17377]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[NUCLEOSIDE-PHOSPHATE-KINASE-RXN]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_275]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_18096]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-12195]]
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***EC-NUMBER
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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* [[Tiso_gene_727]]
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* [[RXN-12196]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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** EXPERIMENTAL_ANNOTATION
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* [[RXN-14074]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_19850]]
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***ec-number
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-14120]]
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* [[Tiso_gene_18920]]
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** in-silico_annotation
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** [[pantograph]]-[[esiliculosus]]
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***ec-number
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== Pathways  ==
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* [[RXN-14228]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[orthology]]:
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***ec-number
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** [[pantograph]]:
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* [[RXN0-5462]]
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*** [[esiliculosus]]
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** in-silico_annotation
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* [[annotation]]:
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***ec-number
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** [[pathwaytools]]:
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* [[UDPKIN-RXN]]
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*** [[experimental_annotation]]
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** in-silico_annotation
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*** [[in-silico_annotation]]
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***ec-number
 +
== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7176]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY-7205]]
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* [[PWY-7224]]
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* [[PWY-7197]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PPGPPMET-PWY]]
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* [[PWY-7226]]
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* [[PWY-7221]]
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* [[PWY-6545]]
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* [[PWY-7187]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=4431}}
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{{#set: common name=sir2-family_protein_hdac1}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=histone_deacetylase}}
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{{#set: right end position=5957}}
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{{#set: common name=ORF}}
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{{#set: centisome position=11.757058    }}
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{{#set: common name=histone_deacetylase_7a}}
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{{#set: reaction associated=ATPASE-RXN|CDPKIN-RXN|DADPKIN-RXN|DCDPKIN-RXN|DGDPKIN-RXN|DTDPKIN-RXN|DUDPKIN-RXN|GDPKIN-RXN|NUCLEOSIDE-DIP-KIN-RXN|NUCLEOSIDE-PHOSPHATE-KINASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN-14074|RXN-14120|RXN-14228|RXN0-5462|UDPKIN-RXN}}
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{{#set: common name=histone_deacetylase_1}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7176|PWY-7220|PWY-7184|PWY-7222|PWY-7205|PWY-7224|PWY-7197|PWY0-166|PWY-7227|PPGPPMET-PWY|PWY-7226|PWY-7221|PWY-6545|PWY-7187}}
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{{#set: ec number=EC-3.5.1.98}}
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−
{{#set: gene associated=Tiso_gene_10459|Tiso_gene_17880|Tiso_gene_17340|Tiso_gene_12946|Tiso_gene_12131|Tiso_gene_16490|Tiso_gene_3315|Tiso_gene_17377|Tiso_gene_275|Tiso_gene_18096|Tiso_gene_727|Tiso_gene_19850|Tiso_gene_18920}}
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−
{{#set: in pathway=}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 17:12, 10 January 2018

Gene Tiso_gene_195

  • left end position:
    • 4431
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5957
  • centisome position:
    • 11.757058
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6098&oldid=16679"