Difference between revisions of "CPD-11409"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9423 == * left end position: ** 1170 * transcription direction: ** NEGATIVE * right end position: ** 3805 * centisome position: ** 12.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN] ==
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== Gene Tiso_gene_9423 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1170
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.1.9 EC-3.5.1.9]
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** NEGATIVE
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* right end position:
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** 3805
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* centisome position:
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** 12.5  
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ATPASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[N-FORMYLKYNURENINE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[CPD-14736]][c] '''+''' 1 [[PROTON]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 H2O[c] '''+''' 1 N-formylkynurenine[c] '''=>''' 1 formate[c] '''+''' 1 L-kynurenine[c] '''+''' 1 H+[c]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12195]]
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* [[Tiso_gene_16921]]
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** in-silico_annotation
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** [[pantograph]]-[[creinhardtii]]
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***ec-number
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== Pathways  ==
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* [[RXN-12196]]
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* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
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** in-silico_annotation
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** '''2''' reactions found over '''5''' reactions in the full pathway
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***ec-number
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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* [[RXN0-5462]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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** in-silico_annotation
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* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
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***ec-number
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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* [[PWY-7184]]
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** '''9''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7198]]
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* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
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* [[PWY-6545]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7210]]
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1170}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13009 13009]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3805}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01959 R01959]
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{{#set: centisome position=12.5    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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{{#set: ec number=EC-3.5.1.9}}
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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{{#set: gene associated=Tiso_gene_16921}}
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{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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Revision as of 17:13, 10 January 2018

Gene Tiso_gene_9423

  • left end position:
    • 1170
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3805
  • centisome position:
    • 12.5
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-11409&oldid=16708"