Difference between revisions of "GLYCINE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Acetic-Esters Acetic-Esters] == * common name: ** an acetic ester * Synonym(s): ** an acetyl es...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Acetic-Esters Acetic-Esters] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** an acetic ester
+
** Adenylate kinase (Fragment) n
 +
** ORF
 +
** adenylate_kinase
 +
** adenylate_kinase_4
 +
** central_pair_complex_1
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.3 EC-2.7.4.3]
 
* Synonym(s):
 
* Synonym(s):
−
** an acetyl ester
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
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* With identifiers:
−
== Reaction(s) of unknown directionality ==
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** 1 [[AMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 2 [[ADP]][c]
−
* [[ALCOHOL-O-ACETYLTRANSFERASE-RXN]]
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* With common name(s):
 +
** 1 AMP[c] '''+''' 1 ATP[c] '''=>''' 2 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_5837]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_5081]]
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** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13477]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1453]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5388]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_19036]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 +
* [[Tiso_gene_5387]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_5839]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[creinhardtii]]
 +
* [[Tiso_gene_12256]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4816]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14116]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_805]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_3353]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_19734]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_694]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_8576]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_12257]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[creinhardtii]]
 +
== Pathways  ==
 +
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[manual]]:
 +
** [[primary_network]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=an acetic ester}}
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* RHEA:
−
{{#set: common name=an acetyl ester}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12973 12973]
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{{#set: consumed or produced by=ALCOHOL-O-ACETYLTRANSFERASE-RXN}}
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00127 R00127]
 +
* UNIPROT:
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** [http://www.uniprot.org/uniprot/P05081 P05081]
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** [http://www.uniprot.org/uniprot/P20425 P20425]
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** [http://www.uniprot.org/uniprot/P08166 P08166]
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** [http://www.uniprot.org/uniprot/P38372 P38372]
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** [http://www.uniprot.org/uniprot/O27699 O27699]
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** [http://www.uniprot.org/uniprot/O29581 O29581]
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** [http://www.uniprot.org/uniprot/O59443 O59443]
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** [http://www.uniprot.org/uniprot/Q9YDD2 Q9YDD2]
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** [http://www.uniprot.org/uniprot/Q9UZN1 Q9UZN1]
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** [http://www.uniprot.org/uniprot/P58117 P58117]
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** [http://www.uniprot.org/uniprot/Q9PHM8 Q9PHM8]
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** [http://www.uniprot.org/uniprot/P54819 P54819]
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** [http://www.uniprot.org/uniprot/O66490 O66490]
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** [http://www.uniprot.org/uniprot/Q9V1V9 Q9V1V9]
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** [http://www.uniprot.org/uniprot/P49973 P49973]
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** [http://www.uniprot.org/uniprot/P24323 P24323]
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** [http://www.uniprot.org/uniprot/P47417 P47417]
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** [http://www.uniprot.org/uniprot/Q9HPA7 Q9HPA7]
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** [http://www.uniprot.org/uniprot/P29410 P29410]
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** [http://www.uniprot.org/uniprot/P16304 P16304]
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** [http://www.uniprot.org/uniprot/P00570 P00570]
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** [http://www.uniprot.org/uniprot/P27142 P27142]
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** [http://www.uniprot.org/uniprot/P07170 P07170]
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** [http://www.uniprot.org/uniprot/P12115 P12115]
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** [http://www.uniprot.org/uniprot/P69441 P69441]
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** [http://www.uniprot.org/uniprot/P00568 P00568]
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** [http://www.uniprot.org/uniprot/P10772 P10772]
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** [http://www.uniprot.org/uniprot/P00571 P00571]
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** [http://www.uniprot.org/uniprot/P00569 P00569]
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** [http://www.uniprot.org/uniprot/P10251 P10251]
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** [http://www.uniprot.org/uniprot/P43417 P43417]
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** [http://www.uniprot.org/uniprot/P49974 P49974]
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** [http://www.uniprot.org/uniprot/P33107 P33107]
 +
** [http://www.uniprot.org/uniprot/P27143 P27143]
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** [http://www.uniprot.org/uniprot/P26364 P26364]
 +
** [http://www.uniprot.org/uniprot/P33075 P33075]
 +
** [http://www.uniprot.org/uniprot/P35140 P35140]
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** [http://www.uniprot.org/uniprot/P35141 P35141]
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** [http://www.uniprot.org/uniprot/P39068 P39068]
 +
** [http://www.uniprot.org/uniprot/P34346 P34346]
 +
** [http://www.uniprot.org/uniprot/P43188 P43188]
 +
** [http://www.uniprot.org/uniprot/P69344 P69344]
 +
** [http://www.uniprot.org/uniprot/P0A0U6 P0A0U6]
 +
** [http://www.uniprot.org/uniprot/P49979 P49979]
 +
** [http://www.uniprot.org/uniprot/Q50299 Q50299]
 +
** [http://www.uniprot.org/uniprot/P43412 P43412]
 +
** [http://www.uniprot.org/uniprot/P72641 P72641]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Adenylate kinase (Fragment) n}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=adenylate_kinase}}
 +
{{#set: common name=adenylate_kinase_4}}
 +
{{#set: common name=central_pair_complex_1}}
 +
{{#set: ec number=EC-2.7.4.3}}
 +
{{#set: gene associated=Tiso_gene_5837|Tiso_gene_5081|Tiso_gene_13477|Tiso_gene_1453|Tiso_gene_5388|Tiso_gene_19036|Tiso_gene_5387|Tiso_gene_5839|Tiso_gene_12256|Tiso_gene_4816|Tiso_gene_14116|Tiso_gene_805|Tiso_gene_3353|Tiso_gene_19734|Tiso_gene_694|Tiso_gene_8576|Tiso_gene_12257}}
 +
{{#set: in pathway=PWY-7219}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:13, 10 January 2018

Reaction ADENYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenylate kinase (Fragment) n
    • ORF
    • adenylate_kinase
    • adenylate_kinase_4
    • central_pair_complex_1
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 ATP[c] => 2 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links









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