Difference between revisions of "CPD-10809"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] == * direction: ** LEFT-TO-RIGHT * common name: ** thiamin phosphate synthase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5841 RXN-5841] == * direction: ** LEFT-TO-RIGHT * common name: ** 5_-nucleotidase ** 5_deoxy_cy...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5841 RXN-5841] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thiamin phosphate synthase
+
** 5_-nucleotidase
 +
** 5_deoxy_cytosolic_type_c_protein
 +
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
 
** ORF
 
** ORF
−
** thiamine_monophosphate_synthase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 1 [[CPD-13575]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[THIAMINE-P]][c]
+
** 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[NICOTINAMIDE_RIBOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[c] '''+''' 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 thiamine phosphate[c]
+
** 1 β-nicotinamide D-ribonucleotide[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 1-(β-D ribofuranosyl)nicotinamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_2160]]
+
* [[Tiso_gene_6640]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_5911]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_6988]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14246]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14435]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_10320]]
+
* [[Tiso_gene_13929]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
* [[Tiso_gene_2159]]
+
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14434]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6894]], thiamine diphosphate biosynthesis I (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894]
+
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30815 30815]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02323 R02323]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thiamin phosphate synthase}}
+
{{#set: common name=5_-nucleotidase}}
 +
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
 +
{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
 
{{#set: common name=ORF}}
 
{{#set: common name=ORF}}
−
{{#set: common name=thiamine_monophosphate_synthase}}
+
{{#set: ec number=EC-3.1.3.5}}
−
{{#set: ec number=EC-2.5.1.3}}
+
{{#set: gene associated=Tiso_gene_6640|Tiso_gene_5911|Tiso_gene_6988|Tiso_gene_14246|Tiso_gene_14435|Tiso_gene_13929|Tiso_gene_14434}}
−
{{#set: gene associated=Tiso_gene_2160|Tiso_gene_10320|Tiso_gene_2159}}
+
{{#set: in pathway=PWY-5381|NAD-BIOSYNTHESIS-II}}
−
{{#set: in pathway=PWY-6894}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:13, 10 January 2018

Reaction RXN-5841

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5_-nucleotidase
    • 5_deoxy_cytosolic_type_c_protein
    • probable_cytosolic_imp-gmp_specific_5_-nucleotidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








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