Difference between revisions of "ACCOAtx"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-3-METHYL-VALERATE 2-KETO-3-METHYL-VALERATE] == * smiles: ** CCC(C)C(=O)C([O-])=O * inchi...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17109 RXN-17109] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-3-METHYL-VALERATE 2-KETO-3-METHYL-VALERATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17109 RXN-17109] ==
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* smiles:
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* direction:
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** CCC(C)C(=O)C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=JVQYSWDUAOAHFM-BYPYZUCNSA-M
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* common name:
 
* common name:
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** (S)-3-methyl-2-oxopentanoate
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** chloroplast_beta-keto_acyl_reductase
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* molecular weight:
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* ec number:
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** 129.135   
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
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** (3S)-3-methyl-2-oxopentanoate
 
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** α-keto-methylvalerate
 
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** 2-oxo-3-methylvalerate
 
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** (S)-2-oxo-3-methylpentanoate
 
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** (S)-3-methyl-2-oxovalerate
 
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** 2-oxo-3-methylpentanoate
 
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** 3-methyl-2-oxopentanoate
 
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** α-keto-β-methyl-valerate
 
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** 2-keto-3-methyl-valerate
 
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** 2-keto-isoleucine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-17329]][c] '''=>''' 1 [[CPD-18489]][c] '''+''' 1 [[NADP]][c]
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* [[DHAD]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 3-oxo-tetracosatetraenoyl-CoA[c] '''=>''' 1 (3R)-hydroxy-tetracosatetraenoyl-CoA[c] '''+''' 1 NADP+[c]
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* [[2KETO-3METHYLVALERATE-RXN]]
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* [[METHYLVALERATE-RXN]]
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== Genes associated with this reaction  ==
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9871]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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** '''5''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* CAS : 1460-34-0
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC35146
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{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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* PUBCHEM:
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{{#set: ec number=EC-1.1.1.330}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6857401 6857401]
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{{#set: gene associated=Tiso_gene_9871}}
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* HMDB : HMDB00491
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{{#set: in pathway=PWY-7726}}
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* LIGAND-CPD:
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{{#set: reconstruction category=annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00671 C00671]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEMSPIDER:
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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** [http://www.chemspider.com/Chemical-Structure.19951083.html 19951083]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=35146 35146]
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* BIGG : 3mop
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{{#set: smiles=CCC(C)C(=O)C([O-])=O}}
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{{#set: inchi key=InChIKey=JVQYSWDUAOAHFM-BYPYZUCNSA-M}}
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{{#set: common name=(S)-3-methyl-2-oxopentanoate}}
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{{#set: molecular weight=129.135    }}
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{{#set: common name=(3S)-3-methyl-2-oxopentanoate|α-keto-methylvalerate|2-oxo-3-methylvalerate|(S)-2-oxo-3-methylpentanoate|(S)-3-methyl-2-oxovalerate|2-oxo-3-methylpentanoate|3-methyl-2-oxopentanoate|α-keto-β-methyl-valerate|2-keto-3-methyl-valerate|2-keto-isoleucine}}
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{{#set: produced by=DIHYDROXYMETVALDEHYDRAT-RXN|DHAD}}
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{{#set: consumed or produced by=2KETO-3METHYLVALERATE-RXN|METHYLVALERATE-RXN|BRANCHED-CHAINAMINOTRANSFERILEU-RXN}}
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Revision as of 18:14, 10 January 2018

Reaction RXN-17109

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • chloroplast_beta-keto_acyl_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 3-oxo-tetracosatetraenoyl-CoA[c] => 1 (3R)-hydroxy-tetracosatetraenoyl-CoA[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_9871
    • IN-SILICO_ANNOTATION
      • EC-NUMBER
    • EXPERIMENTAL_ANNOTATION
      • EC-NUMBER

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 5 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=ACCOAtx&oldid=16851"