Difference between revisions of "RXN-4210"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8529 CPD-8529] == * smiles: ** C(SSC([R2])[R1])([R4])[R3] * common name: ** R'C(R)S-S(R)CR'...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11832 RXN-11832] == * direction: ** LEFT-TO-RIGHT * common name: ** ump-cmp_kinase ** cytidylat...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-8529 CPD-8529] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11832 RXN-11832] ==
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* smiles:
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* direction:
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** C(SSC([R2])[R1])([R4])[R3]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** R'C(R)S-S(R)CR'
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** ump-cmp_kinase
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** cytidylate_kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
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** [http://enzyme.expasy.org/EC/2.7.4.25 EC-2.7.4.25]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[THIOL-OXIDASE-RXN]]
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** 1 [[CMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 CMP[c] '''+''' 1 ATP[c] '''=>''' 1 CDP[c] '''+''' 1 ADP[c]
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 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14116]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19734]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2386]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9739]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7205]], CMP phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7205 PWY-7205]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
 +
** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: smiles=C(SSC([R2])[R1])([R4])[R3]}}
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* RHEA:
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{{#set: common name=R'C(R)S-S(R)CR'}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11600 11600]
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{{#set: produced by=THIOL-OXIDASE-RXN}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00512 R00512]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/O59845 O59845]
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** [http://www.uniprot.org/uniprot/Q29561 Q29561]
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** [http://www.uniprot.org/uniprot/P43892 P43892]
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** [http://www.uniprot.org/uniprot/Q58071 Q58071]
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** [http://www.uniprot.org/uniprot/Q9CEY1 Q9CEY1]
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** [http://www.uniprot.org/uniprot/P57064 P57064]
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** [http://www.uniprot.org/uniprot/P0A6I0 P0A6I0]
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** [http://www.uniprot.org/uniprot/P47572 P47572]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ump-cmp_kinase}}
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{{#set: common name=cytidylate_kinase}}
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{{#set: ec number=EC-2.7.4.14}}
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{{#set: ec number=EC-2.7.4.25}}
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{{#set: gene associated=Tiso_gene_14116|Tiso_gene_19734|Tiso_gene_2386|Tiso_gene_9739}}
 +
{{#set: in pathway=PWY-7205}}
 +
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 17:14, 10 January 2018

Reaction RXN-11832

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ump-cmp_kinase
    • cytidylate_kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 CMP[c] + 1 ATP[c] => 1 CDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7205, CMP phosphorylation: PWY-7205
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links








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