Difference between revisions of "RXN-1125"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1133 RXN0-1133] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrolipoamide_acetyltran...")
 
(Created page with "Category:Gene == Gene Tiso_gene_18652 == * left end position: ** 51 * transcription direction: ** POSITIVE * right end position: ** 2678 * centisome position: ** 1.7665397...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1133 RXN0-1133] ==
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== Gene Tiso_gene_18652 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 51
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* common name:
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* transcription direction:
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** dihydrolipoamide_acetyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.3.1.12 EC-2.3.1.12]
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** 2678
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* centisome position:
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** 1.7665397   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GLYOHMETRANS-RXN]]
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** 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[CO-A]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] '''+''' 1 coenzyme A[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_19780]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2693]]
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* [[RXN0-5234]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***AUTOMATED-NAME-MATCH
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***automated-name-match
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== Pathways ==
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== Pathways associated ==
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* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
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* [[PWY-2161]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1622]]
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== Reconstruction information  ==
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* [[PWY-3841]]
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* [[orthology]]:
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* [[1CMET2-PWY]]
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** [[pantograph]]:
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* [[PWY-3661]]
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*** [[esiliculosus]]
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* [[GLYSYN-PWY]]
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* [[manual]]:
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* [[PWY-5497]]
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** [[primary_network]]
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* [[PWY-2201]]
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* [[annotation]]:
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* [[PWY-181]]
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** [[pathwaytools]]:
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* [[PWY-3661-1]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=51}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02569 R02569]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=2678}}
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** [http://www.uniprot.org/uniprot/Q01991 Q01991]
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{{#set: centisome position=1.7665397    }}
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** [http://www.uniprot.org/uniprot/P12695 P12695]
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{{#set: reaction associated=GLYOHMETRANS-RXN|RXN0-5234}}
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** [http://www.uniprot.org/uniprot/Q7M2M8 Q7M2M8]
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
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** [http://www.uniprot.org/uniprot/P10515 P10515]
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** [http://www.uniprot.org/uniprot/Q39082 Q39082]
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** [http://www.uniprot.org/uniprot/Q9TRP7 Q9TRP7]
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** [http://www.uniprot.org/uniprot/Q7M0X6 Q7M0X6]
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** [http://www.uniprot.org/uniprot/Q59098 Q59098]
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** [http://www.uniprot.org/uniprot/Q9PF09 Q9PF09]
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** [http://www.uniprot.org/uniprot/P35489 P35489]
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** [http://www.uniprot.org/uniprot/P21883 P21883]
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** [http://www.uniprot.org/uniprot/Q59658 Q59658]
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** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
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** [http://www.uniprot.org/uniprot/Q59298 Q59298]
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** [http://www.uniprot.org/uniprot/P45118 P45118]
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** [http://www.uniprot.org/uniprot/Q54102 Q54102]
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** [http://www.uniprot.org/uniprot/P11961 P11961]
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** [http://www.uniprot.org/uniprot/Q59821 Q59821]
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** [http://www.uniprot.org/uniprot/P08461 P08461]
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** [http://www.uniprot.org/uniprot/Q16791 Q16791]
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** [http://www.uniprot.org/uniprot/Q41737 Q41737]
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** [http://www.uniprot.org/uniprot/O64968 O64968]
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** [http://www.uniprot.org/uniprot/P10802 P10802]
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** [http://www.uniprot.org/uniprot/P06959 P06959]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dihydrolipoamide_acetyltransferase}}
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{{#set: ec number=EC-2.3.1.12}}
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{{#set: gene associated=Tiso_gene_19780|Tiso_gene_2693}}
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{{#set: in pathway=PYRUVDEHYD-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:15, 10 January 2018

Gene Tiso_gene_18652

  • left end position:
    • 51
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2678
  • centisome position:
    • 1.7665397
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-1125&oldid=16877"