Difference between revisions of "RXN-10919"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-16551 CPD-16551] == * smiles: ** C(OP([O-])(=O)[O-])C1(C(O)C(O)C(O)O1) * inchi key: ** InCh...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** low_quality_protein:_...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-16551 CPD-16551] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] ==
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* smiles:
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* direction:
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** C(OP([O-])(=O)[O-])C1(C(O)C(O)C(O)O1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KTVPXOYAKDPRHY-TXICZTDVSA-L
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* common name:
 
* common name:
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** β-D-ribose 5-phosphate
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** low_quality_protein:_ribonuclease_3-like
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* molecular weight:
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** mini-ribonuclease_3
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** 228.095   
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.26.3 EC-3.1.26.3]
 
* Synonym(s):
 
* Synonym(s):
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** β-D-ribofuranose 5-phosphate
 
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** 5-O-phosphono-β-D-ribofuranose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-15346]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''+''' 2 [[WATER]][c] '''=>''' 2 [[mRNA-Fragments]][c] '''+''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c]
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* [[RXN-15345]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 RNase III mRNA processing substrate[c] '''+''' 2 H2O[c] '''=>''' 2 an mRNA fragment[c] '''+''' 1 RNase III processing product mRNA[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10649]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10131]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6282]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_608]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7140377 7140377]
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** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P51833 P51833]
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** [http://www.chemspider.com/Chemical-Structure.394672.html 394672]
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** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=1235722 1235722]
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** [http://www.uniprot.org/uniprot/P44441 P44441]
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{{#set: smiles=C(OP([O-])(=O)[O-])C1(C(O)C(O)C(O)O1)}}
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** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
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{{#set: inchi key=InChIKey=KTVPXOYAKDPRHY-TXICZTDVSA-L}}
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** [http://www.uniprot.org/uniprot/P09155 P09155]
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{{#set: common name=β-D-ribose 5-phosphate}}
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** [http://www.uniprot.org/uniprot/Q52698 Q52698]
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{{#set: molecular weight=228.095    }}
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** [http://www.uniprot.org/uniprot/Q49034 Q49034]
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{{#set: common name=β-D-ribofuranose 5-phosphate|5-O-phosphono-β-D-ribofuranose}}
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** [http://www.uniprot.org/uniprot/O69469 O69469]
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{{#set: consumed by=RXN-15346}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: produced by=RXN-15345}}
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{{#set: common name=low_quality_protein:_ribonuclease_3-like}}
 +
{{#set: common name=mini-ribonuclease_3}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.26.3}}
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{{#set: gene associated=Tiso_gene_10649|Tiso_gene_10131|Tiso_gene_10752|Tiso_gene_6282|Tiso_gene_10753|Tiso_gene_608}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:16, 10 January 2018

Reaction 3.1.26.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • low_quality_protein:_ribonuclease_3-like
    • mini-ribonuclease_3
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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