Difference between revisions of "2.1.1.127-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** low_quality_protein:_...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1600 == * left end position: ** 16252 * transcription direction: ** POSITIVE * right end position: ** 17574 * centisome position: ** 70.574...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.3-RXN 3.1.26.3-RXN] ==
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== Gene Tiso_gene_1600 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 16252
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* common name:
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* transcription direction:
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** low_quality_protein:_ribonuclease_3-like
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** POSITIVE
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** mini-ribonuclease_3
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* right end position:
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** ORF
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** 17574
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/3.1.26.3 EC-3.1.26.3]
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** 70.57495   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[CARBODEHYDRAT-RXN]]
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** 2 [[WATER]][c] '''+''' 1 [[RNASE-III-MRNA-PROCESSING-SUBSTRATE]][c] '''=>''' 2 [[mRNA-Fragments]][c] '''+''' 1 [[RNASE-III-PROCESSING-PRODUCT-MRNA]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 2 H2O[c] '''+''' 1 RNase III mRNA processing substrate[c] '''=>''' 2 an mRNA fragment[c] '''+''' 1 RNase III processing product mRNA[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_10649]]
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* [[RXN0-5224]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_10131]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10752]]
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== Pathways associated ==
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** IN-SILICO_ANNOTATION
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* [[PWY-241]]
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***EC-NUMBER
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* [[PWYQT-4429]]
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* [[Tiso_gene_6282]]
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* [[PWY-7117]]
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** IN-SILICO_ANNOTATION
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* [[PWY-7115]]
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***EC-NUMBER
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* [[PWY-6142]]
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* [[Tiso_gene_10753]]
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* [[CYANCAT-PWY]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_608]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: left end position=16252}}
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** [http://www.uniprot.org/uniprot/Q9PM40 Q9PM40]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P51833 P51833]
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{{#set: right end position=17574}}
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** [http://www.uniprot.org/uniprot/Q9CHD0 Q9CHD0]
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{{#set: centisome position=70.57495    }}
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** [http://www.uniprot.org/uniprot/Q9JVD3 Q9JVD3]
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{{#set: reaction associated=CARBODEHYDRAT-RXN|RXN0-5224}}
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** [http://www.uniprot.org/uniprot/P44441 P44441]
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{{#set: pathway associated=PWY-241|PWYQT-4429|PWY-7117|PWY-7115|PWY-6142|CYANCAT-PWY}}
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** [http://www.uniprot.org/uniprot/P0A7Y0 P0A7Y0]
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** [http://www.uniprot.org/uniprot/P09155 P09155]
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** [http://www.uniprot.org/uniprot/Q52698 Q52698]
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** [http://www.uniprot.org/uniprot/Q49034 Q49034]
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** [http://www.uniprot.org/uniprot/O69469 O69469]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=low_quality_protein:_ribonuclease_3-like}}
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{{#set: common name=mini-ribonuclease_3}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-3.1.26.3}}
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{{#set: gene associated=Tiso_gene_10649|Tiso_gene_10131|Tiso_gene_10752|Tiso_gene_6282|Tiso_gene_10753|Tiso_gene_608}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:17, 10 January 2018

Gene Tiso_gene_1600

  • left end position:
    • 16252
  • transcription direction:
    • POSITIVE
  • right end position:
    • 17574
  • centisome position:
    • 70.57495
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=2.1.1.127-RXN&oldid=17038"